Gene Dhaf_4253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4253 
Symbol 
ID7261277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp4502228 
End bp4502875 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content45% 
IMG OID643564170 
ProductHelix-turn-helix type 11 domain protein 
Protein accessionYP_002460695 
Protein GI219670260 
COG category[R] General function prediction only 
COG ID[COG0517] FOG: CBS domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAGTTTA CGGAACGTCA AGCAAGAATT GTAGAAATCG TAAAGAATTC AAGCCCAATT 
ACTGGGGAAC AAATCGCTGC AAAGCTTGAT TTGACACGAG CGACCCTGCG TCCTGACCTG 
ACGATTTTAA CCATGGCAGG GGTCCTCGAA GCCCGACCGA GGGTAGGATA CTTTTATAAG 
GAGAAGAAGA AAACATCACC TTATATGGAT CGACTTCGCC AGCTCAGGGT GGGTGATTTT 
AAATCCCTTC CCATATCTAT CCGGGAAAAC ATCAGTATTT ATGATGCCAT AGTCACTATG 
TTTACCCAAA ATGTCGGAAG TCTGACAGTG GTTGGGGAAG GCCAAACCTT AAGGGGAATG 
GTGTCCCGGA AAGATTTGCT TAAATCTACC CTGGGTAAAA CCGATCTTCA GCAGGTTCCC 
GTGAGTATCA TTATGACCCG GATGCCTAAT ATTATTATGA CGACAGCGGA CGAACCGGTT 
CTCGAAGCAG CAAGGAAATT AACCCTGCAT CAAATTGACA CCTTGCCTGT TGTAGAAGCC 
TTTATTGATG AAAAAGGTGA GGAGCGCTAT GAAGTCATAG GACGTTTCAC CAAGACGAAC 
GTTACGAAAC TCTTTGTTCA GATCGGGTCA TTAGGTGCCC AATCATGA
 
Protein sequence
MEFTERQARI VEIVKNSSPI TGEQIAAKLD LTRATLRPDL TILTMAGVLE ARPRVGYFYK 
EKKKTSPYMD RLRQLRVGDF KSLPISIREN ISIYDAIVTM FTQNVGSLTV VGEGQTLRGM 
VSRKDLLKST LGKTDLQQVP VSIIMTRMPN IIMTTADEPV LEAARKLTLH QIDTLPVVEA 
FIDEKGEERY EVIGRFTKTN VTKLFVQIGS LGAQS