| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4217 |
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| Symbol | |
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| ID | 7261241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 4461217 |
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| End bp | 4463061 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643564135 |
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| Product | DNA primase |
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| Protein accession | YP_002460660 |
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| Protein GI | 219670225 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000725747 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACTACA GAATTCCTGA GGAGATCGTT GAAGAAGTCA GATTGCGTTC CGATATCGTG
GATACAATTT CCGAATACGT ACGGCTTCAA CGGAAAGGGA AGAATTACCT GGGCCTCTGT
CCGTTTCATG CGGAGAAAAC CCCGAGTTTT ACGGTGACCC CGGACAAGCA GATTTTTTAT
TGCTTCGGTT GCCATACGGG CGGTAATGTA TTTTCTTTTT TAATGAAAAA GGAAAACTGG
AATTTTGTCG AAACGGTGGA GCATTTAGCT CAAAAACACG GTATTGTTCT CCCGGAGAAA
GAGCTTTCAC CCCGTGAGAA AGAACAACAA ACCCGTCGAC GTCGTTGGGA AGAGATTCAC
GATTGGGCAA CGGGTTATTT TCATGAGGTC CTGCTGCATA GACCTGAAGG AGAGCCTGGA
AGGCAATACT TTCAGCAGCG AGGGATGGAC GAGGAGACCA TCAAGCAATT TCGTTTAGGT
TATGCCCCCG ATCGATGGGA CGGACTGCTT GAAGCCCTCA GCGCCCGGGG GGTAAGCCCC
CAGGAGTTGG CTCAAGCCGG GCTTGCCTTA GAGCGAGACC AGTCGGAGGG AAGGTCCCGT
GGCTTTTACG ACCGTTTTCG AAAAAGGGTA ATATTTGCCA TACTCGACTC CCGTCACAAG
ACCATTGGCT TTGGCGGGCG GGTCTTAGAT CATTCTACAC CAAAATATCT GAATTCACCA
GAGACTGCTT TTTTTAATAA GGGACATCAT TTATACGGAA TGCACCGAGC TCACCAGGGG
ATCCGGGAAC ACGGATTTGC TCTTCTGGCG GAAGGTTACA TGGATGTTAT CGCCTTACAA
AAAGCAGGCT TCAAAAATGC AGTAGCTTCT TTAGGAACGG CCTTAACCCG GGATCAGGCA
AAACTGATCC ATCGCTACAC TGGGCGTGTG GTGGTTGTTT ATGATTCGGA TCAGGCCGGC
ACTCAAGCAA CCCTTCGGGC GGGTGAGCTA TTGCAGGACA TGGGTTTTCG GGTAGATATA
TTAAGGCTGT CCGGGGCTAA GGACCCGGAT GAATATCTTA AAACCTTCGG AGTGGAAGAA
TTTAATAAAG CGTTAGCTCA AGCGGAACCC TATATTCAAT TTAAATATCA GGTCCATGTC
CAAACGAAAC CAACCCTATC AGCTCCGGAG AAAGCAGAAT TGGTCCGAGA ATTAGCACCG
GATATCGTCA AAGTGCAAAG TCCTGTCGAG CGGGAAGGGT ATGAGCGGTT TTTGAGTTTG
GAGCTGGGTC TGACCTTAGA TAGGGTTCAA GAGGAAATTG CAGGATTTGA CCGGAAACCT
TCGAAAAAGG CCTCTGGAGA GGAATTATTT CGTAACAAAC AGGATATTTC TGTAAAAAAC
AGGGATAATA TCAATAGGTG TGCAAATCCG ACTCCAAGCG GAGCGTCAGT TCCTGATGGA
GTGATTCGAG CTGAGCGAGT TTTGTTGCGT CTTTTGCTTG AACAATTAAT TCCTGTCTCA
GAATTCAAGG ATCAATGGGT CGAGGGATTT TGGAAGGTAG CGTATCATCA GCAGATATTT
GATTATATTG AAAAAGCGCG CTGTATCGGC AATGGAGCTT TGTCGGGTAT GGAATCGGGC
CCTTTGCAAA GCAAAGTAGC CCAGATCATG CTGGAAGACA TGGAGCTAGC CAACCCGCAA
CGACTTTTTC ATGATTGCAT GAAACAGATT CATTCGATGA GCGAAGAAGA AACTGTGGAA
GAGCTTCAGG CTCGAATGGT TGAATTAGAA AAATCCGGCG ATTTGACAGG TGCTTTAGCC
CTGTTAAAAG AGATAGGAGA GCGGTTGAGA AGTGGCGAAA AGTAA
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| Protein sequence | MDYRIPEEIV EEVRLRSDIV DTISEYVRLQ RKGKNYLGLC PFHAEKTPSF TVTPDKQIFY
CFGCHTGGNV FSFLMKKENW NFVETVEHLA QKHGIVLPEK ELSPREKEQQ TRRRRWEEIH
DWATGYFHEV LLHRPEGEPG RQYFQQRGMD EETIKQFRLG YAPDRWDGLL EALSARGVSP
QELAQAGLAL ERDQSEGRSR GFYDRFRKRV IFAILDSRHK TIGFGGRVLD HSTPKYLNSP
ETAFFNKGHH LYGMHRAHQG IREHGFALLA EGYMDVIALQ KAGFKNAVAS LGTALTRDQA
KLIHRYTGRV VVVYDSDQAG TQATLRAGEL LQDMGFRVDI LRLSGAKDPD EYLKTFGVEE
FNKALAQAEP YIQFKYQVHV QTKPTLSAPE KAELVRELAP DIVKVQSPVE REGYERFLSL
ELGLTLDRVQ EEIAGFDRKP SKKASGEELF RNKQDISVKN RDNINRCANP TPSGASVPDG
VIRAERVLLR LLLEQLIPVS EFKDQWVEGF WKVAYHQQIF DYIEKARCIG NGALSGMESG
PLQSKVAQIM LEDMELANPQ RLFHDCMKQI HSMSEEETVE ELQARMVELE KSGDLTGALA
LLKEIGERLR SGEK
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