Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_3768 |
Symbol | |
ID | 7260789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 4002408 |
End bp | 4003955 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643563692 |
Product | flavocytochrome c |
Protein accession | YP_002460220 |
Protein GI | 219669785 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01813] flavocytochrome c |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.226332 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCAAA AAGCAGTTGA TAGAAGACAA TTTTTAAAAA CGATGGCTTT AGCCGGCGTA TCCATTGCCG GTATGGGAAC CCTGGTCGGT TGTTCAGCAG GAGCAGCGAA TCCGGCACCT CAGCCCGCCC AAGCCGGTCC GGAATGGAAG GAAGAGACCG ATGTGGTTGT CATCGGCAGC GGTTTTGCAG GTCTGGCAGC CGCCCTGGAA GTCCTCGAGG CAGGTTCACA GGTCATTATC TTGGAAAAGA TGCCTGTGAG CGGAGGGAAC TCAGCTATTA ATGGCGGAGA TATGTGCTGT GCCAATACGA AGATGCAAAA AGCCGCAGGC GTTGAGGATT CTGTCGAACT TATGGTAGCG GATATGCTAA AGGCCGGCGG CAATATCAAT CATGTGGATA AGGCCACCCT TGTCGCAGAA AAATCCAACG AAGCATTGGA ATGGTGTCAG AATTATCTGG GCATGAAATT CAGAGAAAAA CTGAATTACC ATGGCGGTCA TTCTGTATTA AGAGCTCATC AATCGGAAGA GGCTTCCGGC TCAGGGTACA TTAAGGCTAT GCTGGCGAAG TTAGAAGGAA AAGGTATATC CGTTTCGAAC AATAGAAAAT TCGTCCGCTT CATGGAAAAT GATGAGAAAC GGATCATCGG CGTGGAAGTG TTGGATGGTT ATAAATATGG CAACGAGAGC AGTGGGACAC CGCTGCTGAT CAAAGCCAGG AAGGCCGTCA TTATCGCTTC CGGCGGGTTC TCCCAGGACA TCAGGATGCG TACCATCCAC GATCCCAGAA TCACTGACAA ATTCTCCAGC ACCAACCATC TGGGTGCTAC GGGGGAGGCC CTGCGAGAGG CGCTGAAGCA TGAAGCCATG GATGTGCATA TGGATTGGAT TCAGCTTGGG CCCTGGACCA GCCCTGACGA AAAGGGATTT GGCTATGTGC CCCAGTTCGT CGAACGGCTG GTTGGCTTTG CTCCCATGAT CGACGTTAAA ACCGGCAAGC GGTTTATTAT GGAATCGGGG AACCGGAAGG TCAGAGCGGA TGCGATCATT GCTTTGGGTG AACCCGGTAT TCATGTGGCT GACGAATATG CTGTGAAGCT GCAGATTCTG CCCCAAATTC TCGAAGGAGC GATGGGGAAC GGCTCCATTA AGAAATACGA TACTCTCGAA GAAGTGGCCA AAGCCTACAA TGTTCCGGTG GAACCCTTCC TGGCTGAAAT CAAGCGTTGG AACTCCTTTG TCCTCAAGGG CAAAGATGAT GATTTCAACT GCATGATTAT GGAGGGGGCT AAACCCACTG AACAAGGACC CTTCTATGTT ACCCGCATGT GGCCTAAGGT TCACCATACC ATGGGCGGGC TTATGACCAA TCTGCAAACC CAGGTGATCA ATCAGGATTT TGAACCGATC AAAGGGCTTT ATGCCGCCGG TGAAGTCACT GGAGGTATCC ATGGTGCGGT GCGTCTGGGT GGAGTAGCGT GTACAGACTG CATCGTCAAT GGCCGCATCA GCGGGCAGGA AGCGGCCAAA GCAGAGGCCT GGGGTTAG
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Protein sequence | MTQKAVDRRQ FLKTMALAGV SIAGMGTLVG CSAGAANPAP QPAQAGPEWK EETDVVVIGS GFAGLAAALE VLEAGSQVII LEKMPVSGGN SAINGGDMCC ANTKMQKAAG VEDSVELMVA DMLKAGGNIN HVDKATLVAE KSNEALEWCQ NYLGMKFREK LNYHGGHSVL RAHQSEEASG SGYIKAMLAK LEGKGISVSN NRKFVRFMEN DEKRIIGVEV LDGYKYGNES SGTPLLIKAR KAVIIASGGF SQDIRMRTIH DPRITDKFSS TNHLGATGEA LREALKHEAM DVHMDWIQLG PWTSPDEKGF GYVPQFVERL VGFAPMIDVK TGKRFIMESG NRKVRADAII ALGEPGIHVA DEYAVKLQIL PQILEGAMGN GSIKKYDTLE EVAKAYNVPV EPFLAEIKRW NSFVLKGKDD DFNCMIMEGA KPTEQGPFYV TRMWPKVHHT MGGLMTNLQT QVINQDFEPI KGLYAAGEVT GGIHGAVRLG GVACTDCIVN GRISGQEAAK AEAWG
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