Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_3679 |
Symbol | |
ID | 7260700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 3913624 |
End bp | 3915105 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 643563604 |
Product | NusA antitermination factor |
Protein accession | YP_002460132 |
Protein GI | 219669697 |
COG category | [K] Transcription |
COG ID | [COG0195] Transcription elongation factor |
TIGRFAM ID | [TIGR01953] transcription termination factor NusA |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000000224558 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATGG AGTTCATTGA GGCCCTCCAT GAATTGGAGA AAGACAGAGG GATCTCAGCG GATATTCTGT TTGAAGCCAT TGAAGCGGCC CTGATATCTG CTTACAAGAA AAATTTTGCT TCATTACAGA ATGTCCGGGT ACATATCGAC CGTATGACTG GAGAGTTCAA AGTTTTCGCC CGGAAAAACG TGGTGGAAGA GGTTGAAGAT TCACGAACTC AGGTAAGTAT GGAAGAAGCA CAGAAGATTG ACCCCAACTA TGCCATCGAT GATGTGGTGG AATACGAAGT CACGCCCCGT GAATTTGGGC GGATTGCGGC TCAGACAGCT AAACAAGTAG TAGTGCAAAG AATTCGTGAA GCTGAGCGGG GCATGATTTA CGATGAATAT ATCAACCGGG AAGGGGATAT CGTTACCGGA ATTGTTCAGC GCTATGATCA GAAAAACGTC ATTGTTGATT TAGGTAAGGT AGAGGCCATT CTGACAGCAC AGGAACAAAT TCCCGGTGAG ACTTATCAAC CCTTTGAGCG GATTAAGACC TTTGTGGTAG AAGTCAAAAA AACAACCAAA GGGCCTCAGG TCATGCTCTC CCGTACCCAC CCGGGTCTGA TTAAACGTTT GTTTGAACTG GAAGTGCCGG AAATCCATGA CGGACTGGTT GAGATTAAAG GTGTGTCCCG GGAGGCGGGA GCCCGCTCTA AAATCGCTGT TTATTCCCGG GATGCCAATG TAGATCCTGT GGGGGCTTGC GTAGGACCGA AAGGCAGCCG GGTTCAAACC ATTGTTACCG AGTTGAAGGG TGAAAAGATA GACATCGTCA ATTATTCCAC AGATCCTGAG GAATTTGTGG CTAATGCCCT TTCCCCGGCC AAAGTTGTGG GAGTATACCC TAAACCTAAT GAGAAAGTGG CTTTGGTCGT AGTTCCCGAC TATCAATTAT CCCTGGCGAT CGGCAAAGAA GGTCAAAATG CCCGTTTGGC CGCCAAGCTG ACCAATTGGA AGATTGACAT TAAGAGTGAG TCCCAGGCCC TGGCCCAAAA TCTTATTCCC GATAAGAATG AAGTCCAGGG AGAATACGAA GAGTACGACG AATTCGCTGA TTATGCAGAG TATGAAAACT ACGATGAATA TGAAGACTAT AGCGAATACG ATGACTATGA AGAGAATGAG GACTACGATG AAAACGCGAC CTATGGGGAG AATTATGATG ATGAGCTGGT TTATGATGAG AATGACCAGT ATGAGGAATT CGATGCTTAT CAAAATGAAG AACTTCCCTA CGAAGAAAGC GAAGACTATG CAGCGACTCC GGATAACGGG GAGCCTAAGG CCGAAAATGC TGAGGAAAAC TATGCCTACA CAGAGTCAGG CGATAAGGAA GAACGACTGA CGGAACGGGA TCGGTCCATG ATGAAATACT TTGAAGCGGA TGAGAAAAAC AGCCGCAAGG AGAAAAAGAA GAAAGCCAAA GGCAAAAGGT AG
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Protein sequence | MNMEFIEALH ELEKDRGISA DILFEAIEAA LISAYKKNFA SLQNVRVHID RMTGEFKVFA RKNVVEEVED SRTQVSMEEA QKIDPNYAID DVVEYEVTPR EFGRIAAQTA KQVVVQRIRE AERGMIYDEY INREGDIVTG IVQRYDQKNV IVDLGKVEAI LTAQEQIPGE TYQPFERIKT FVVEVKKTTK GPQVMLSRTH PGLIKRLFEL EVPEIHDGLV EIKGVSREAG ARSKIAVYSR DANVDPVGAC VGPKGSRVQT IVTELKGEKI DIVNYSTDPE EFVANALSPA KVVGVYPKPN EKVALVVVPD YQLSLAIGKE GQNARLAAKL TNWKIDIKSE SQALAQNLIP DKNEVQGEYE EYDEFADYAE YENYDEYEDY SEYDDYEENE DYDENATYGE NYDDELVYDE NDQYEEFDAY QNEELPYEES EDYAATPDNG EPKAENAEEN YAYTESGDKE ERLTERDRSM MKYFEADEKN SRKEKKKKAK GKR
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