| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3587 |
|---|
| Symbol | |
|---|
| ID | 7260605 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 3809885 |
|---|
| End bp | 3811159 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643563509 |
|---|
| Product | histidyl-tRNA synthetase |
|---|
| Protein accession | YP_002460040 |
|---|
| Protein GI | 219669605 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0124] Histidyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0000170234 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTATTC AACGTCCGAA AGGAACACAG GACTTGCTGC CCGGAGTGGT GGAACAATGG
CAGGACCTTG AAGAACAGAT CCGGAAGATC TGTAGGGAAT ATGGCTATCA GGAGATTCGT
ACTCCTATCT TTGAAGCCAC GGAGTTGTTT CAACGAGGGG TGGGTGAAAC CACGGATATC
GTTAATAAGG AAATGTACAC TTTTCTTGAT AAAGGAGATC GTTCCATTAC CCTGCGCCCG
GAAGGGACAG CCTCGGTGTG TCGTGCCTAT GTAGAGAACA AGCTCCATGG CGGGCCCCAA
CCCGTAAAGC TCTACTACAT TGGCCCCATG TTCCGTTATG AGCGTCCTCA ATCGGGAAGG
TTCCGGCAAT TCCATCAGTT TGGGGTAGAG GTTCTGGGAG TGGATAAACC CATGGTGGAT
GCGGAGGTCA TTACCCTGGT GTGGGATTTG TACAGCCGTT TAGGGTTGAA GGGATTGGAA
GTTCATGTGA ATTCCGTCGG CTGCCCGAGC TGCCGTCCGG AGCATAAGAA GAAACTCCAG
GAATTCCTGG CTCCCCGCCA GGAGCAACTC TGTAAGGATT GTCAGTCGCG CTTTGAGAAA
AATCCCTTGC GGATACTGGA CTGTAAGAAC CCAACCTGTC AGGAGATCAC CCAGGGAGCA
CCGACGACCC TGGATACTCT ATGTGAGGAG TGTGCAGAAC ACTTTAAGGA ACTGCAGAGC
TTACTGAGTG CCGCTGAAGT CGTCTATAAA GTCAATCCCC GCCTGGTGAG GGGACTGGAT
TATTATCGTA AGACCGCTTT TGAAGTCCTG GTAGAGGATA TAGGTGCTCA AAGCGCCATC
TGCGGAGGGG GCCGCTATGA CGGCCTTGTC CAGGAAGTAG GCGGGCCTCC GACCCCTGGT
ATCGGTTTTG CCATGGGAAT GGAGCGGGTA CTGGCCGCCC GGAAGCTTGC TCAGGGAGAG
CAGGAAGGGG AAGGAAAAGA GTATTTGATG CTGGTGGCCT TAGGGGACCA AGCCCAAAGG
GAAGGTTTCG CCATCGTCAG CCGTCTGCGG AAGCAGGGAA TGCCTGCCGG AATTGACCTA
TTAGGCCGGA GCCTTAAAGC CCAGCTTAAG GCAGCCGATC GGGTTCAGGC TCACTATGCT
GCCATTCTCG GGGAAGAGGA ACTCCATAAA GGAATCATTA TTTTGCGGGA TCTCAGGCTG
GGAGAACAGG TTGAATTACC GCTTCAGGAC TTTGAAGAGG TTGTGTGGAA GAGATATAAG
GAGGATGGAA ATTAA
|
|---|
| Protein sequence | MAIQRPKGTQ DLLPGVVEQW QDLEEQIRKI CREYGYQEIR TPIFEATELF QRGVGETTDI
VNKEMYTFLD KGDRSITLRP EGTASVCRAY VENKLHGGPQ PVKLYYIGPM FRYERPQSGR
FRQFHQFGVE VLGVDKPMVD AEVITLVWDL YSRLGLKGLE VHVNSVGCPS CRPEHKKKLQ
EFLAPRQEQL CKDCQSRFEK NPLRILDCKN PTCQEITQGA PTTLDTLCEE CAEHFKELQS
LLSAAEVVYK VNPRLVRGLD YYRKTAFEVL VEDIGAQSAI CGGGRYDGLV QEVGGPPTPG
IGFAMGMERV LAARKLAQGE QEGEGKEYLM LVALGDQAQR EGFAIVSRLR KQGMPAGIDL
LGRSLKAQLK AADRVQAHYA AILGEEELHK GIIILRDLRL GEQVELPLQD FEEVVWKRYK
EDGN
|
|---|
| |