Gene Dhaf_3504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3504 
Symbol 
ID7260522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp3736493 
End bp3736939 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content45% 
IMG OID643563427 
ProductNusB antitermination factor 
Protein accessionYP_002459958 
Protein GI219669523 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00000000202631 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCGCA GATTAGCTCG GGAAACCGCA TTGCAAGTTT TATTCCAGCT GGAGATGACT 
GGGGAAAGCC AGGACCTGAA GTCCGCAATT CACAAATGGG CGGATGAATT TGCTGTTCCG 
GAAGGAAGTA TTCCTTTTGC AGAGGAACTG GCGGAAGGAA CATTGACTCA CAAAGAAGTG 
ATCGATGAGA ATCTGGAGAA ATTATCCGAA GGCTGGTCAT TAGCACGGAT GGCTAATGTG 
GATCGGAATC TTTTACGCCT TGCCAGTTAT GAAATCCTCT TTCGGAAAGA TATTCCCGGC 
CGGGTGACCA TTAATGAAGC CATAGAAATC GCCAAACGCT ATGGCAGTGA AGAATCCGGC 
AAATTTATCA ATGGTATATT GGATAAAGTC GTGGAAAGCG TCAACAAAAA GGATGAAAAA 
GGGAATGACA CTCTATCTCG GGATTGA
 
Protein sequence
MSRRLARETA LQVLFQLEMT GESQDLKSAI HKWADEFAVP EGSIPFAEEL AEGTLTHKEV 
IDENLEKLSE GWSLARMANV DRNLLRLASY EILFRKDIPG RVTINEAIEI AKRYGSEESG 
KFINGILDKV VESVNKKDEK GNDTLSRD