Gene Dhaf_3289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3289 
Symbol 
ID7260305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3519363 
End bp3519884 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content48% 
IMG OID643563210 
Productsignal peptidase I 
Protein accessionYP_002459743 
Protein GI219669308 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0681] Signal peptidase I 
TIGRFAM ID[TIGR02227] signal peptidase I, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000862301 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAT ATTTACGCAC AATTTTGGAA TGGGGAATTT TGATTGTAGT CGCCTGGGTG 
TTGTCCTTTG GCATCAGGAC CTATCTTATT GACACCCGCA TCGTCCCGAC CGGTTCCATG
CTCCCTACTA TCCAACTTCA GGATCGCTTA ATCTTCGATA AGGTGTTTTA CAAAAATAAA
CCCCTCCAGC GTGGGGATAT CATTATGTTT ACCGCTCCGG AGGGTTCGGG AGAGCATGAT
GATTTGGTGA AGCGGATCAT CGGTTTGCCT GGGGACACTT TAGAGGTCAG AGAAGGCAAG
GTCTGGATCA ATGGTGAAGC CATCGAGGAA CCTTATCTGA AAGAGGCTCC TGAATATGAA
TATGGACCTA TCCAGATTCC TGAGGGAGCG TATCTTGTGT TTGGGGATAA TCGCAACAAC
AGCAAGGACA GTCATGTCTG GGGGTTTGTT CCTGAAGAGA ATATCGAAGG CAAGGTTCTG
CTGCGTTATT GGCCTCTGGA ACGCTGGGGC GCCCTTAAGT AA
 
Protein sequence
MKKYLRTILE WGILIVVAWV LSFGIRTYLI DTRIVPTGSM LPTIQLQDRL IFDKVFYKNK 
PLQRGDIIMF TAPEGSGEHD DLVKRIIGLP GDTLEVREGK VWINGEAIEE PYLKEAPEYE
YGPIQIPEGA YLVFGDNRNN SKDSHVWGFV PEENIEGKVL LRYWPLERWG ALK