Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_2825 |
Symbol | |
ID | 7259833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 3032158 |
End bp | 3033579 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 643562744 |
Product | drug resistance transporter, EmrB/QacA subfamily |
Protein accession | YP_002459285 |
Protein GI | 219668850 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.448147 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGGTA AGAGTGGAAA GGCTCCGGAA CTTGAGCCGA TTCCCAAGAA TATCATGAAC ATTGCTTGGA TTTTAGTGCT TGGGGCAATT ATGCCACTGC TTGATTCAAC AATGGTCAAC ATTGCGATCA ATCACTTGAG TCATGATTTC AGTATCGGAC TTGATTTAAT TCAATGGGTC ATTACGGGTT ATGTGTTAGC CATGGCAATT TCCGTACCGC TTGCCGGTTG GATGGTTCAA CGGTTCAACG GCAAATGGTT AATGATTGGT GCCAATATCT TATTTTTAGC CGCTTCGATT GCTTCGGGAT TCAGCTGGAG TATCCATTCA TTGATTATTT TCCGGGTTGT TCAAGGTTTC AGTGCCGGCT TTATTATGAC CTTGGTGACT ACCTTGTGTG TCGAAACCGC TGGAAGGGAG CGAATGGGAC GTTTGATGTC AACCATTGGT ATTCCAACGG TCTTGGGCCC AATCCTGGGT CCGGTTATTG GAGCCGTGAT TGTCCAATTC TTGTCATGGC GTTATATTTT CTTTGTCAAT ATTCCCCTCG GTATTCTGGC CATCACGTTG ATGATTTGGA AGCTGCCTGA CTTCACGCCG GCAAACATAA AAGCCAAATT CGACTTCATC GGTATCATTT TATTGGGCAC TGCCTCTGCT GCCTTGATTT ATGGAATTAC TAAAGCAGCG AAAAGTGCTA CATTTAACAA CAGCACGACT ATCGCTTATG GAGTCGCCGG AATCGCCATT TTAGCCATCT ACATGATTTA CGCTGCTCTC AAAAAGGATC AAGCCATTCT CCCCTTGCAC TTGTTTAGGT TGAAAAATTT CAGTGCTGTC ATGGTTGGCT TGTTCCTGGC GGGGATTGCC ACCAACGGCC CAATGTTGTT ATTGCCTTTG TTTTTCCAAA ACATTAAGGG CTTCTCCGTT TTGAACACCG GCTTGATTTT GATTCCGCAA GGTATCGGTA TGCTGATTGC TCGCCCCTTG ATTGGTAAGC TAACTGACAA ATGGGGTGCG CGTAATGTTG TCTTGGTCAG TTTGGCTTTG ACCATCGTTG GCACGATTCC CTTTATATTC ATCAATGAGG CATCTTCACT CTTTGTTGTC AGTCTTGTCT TATTTGTGCG CGGTGTGGGG ATCGGCGGCG TCACTATTCC CATGATGACT GATGCCTACA CAGGTATGGT CAAACAAGAA ATCGCCCAAG CCAGTGTCGG AACCCGGCTC ATGCAAAATA TCGGTGGTGC GTTTGGTTCA GCAGTAATGG CCACGGCCGT CAGCCTTTCA ATCCAAGGTA AAACGCCAAC GATCCCACTC ATGACCACTG CTTACCACGA TGGTTTCATG TTAGCTTTAG TTCTTAGTTT GGTATTAGTC ATTCCAAGTT TGTTTTTAAC GAACAAGACA GCTAAGCAAT AG
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Protein sequence | MMGKSGKAPE LEPIPKNIMN IAWILVLGAI MPLLDSTMVN IAINHLSHDF SIGLDLIQWV ITGYVLAMAI SVPLAGWMVQ RFNGKWLMIG ANILFLAASI ASGFSWSIHS LIIFRVVQGF SAGFIMTLVT TLCVETAGRE RMGRLMSTIG IPTVLGPILG PVIGAVIVQF LSWRYIFFVN IPLGILAITL MIWKLPDFTP ANIKAKFDFI GIILLGTASA ALIYGITKAA KSATFNNSTT IAYGVAGIAI LAIYMIYAAL KKDQAILPLH LFRLKNFSAV MVGLFLAGIA TNGPMLLLPL FFQNIKGFSV LNTGLILIPQ GIGMLIARPL IGKLTDKWGA RNVVLVSLAL TIVGTIPFIF INEASSLFVV SLVLFVRGVG IGGVTIPMMT DAYTGMVKQE IAQASVGTRL MQNIGGAFGS AVMATAVSLS IQGKTPTIPL MTTAYHDGFM LALVLSLVLV IPSLFLTNKT AKQ
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