Gene Dhaf_2187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2187 
Symbol 
ID7259156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp2359673 
End bp2360344 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content50% 
IMG OID643562077 
ProductCRISPR-associated protein Cas4 
Protein accessionYP_002458657 
Protein GI219668222 
COG category[L] Replication, recombination and repair 
COG ID[COG1468] RecB family exonuclease 
TIGRFAM ID[TIGR00372] CRISPR-associated protein Cas4 


Plasmid Coverage information

Num covering plasmid clones77 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATATC AAGAAGACGA TTTCCTGCTC TTATCGGGCA TCCAGCACTA TGTGTTTTGC 
AAACGCCAAT GGGCCTTGAT CCACATTGAA CAGCAATGGC AGGAAAACTT CCGTACCATC 
GAAGGGGCAA TCCTGCACGA GAAAACCCAT GACTCGACGA TCAAGGAAAA GCGGGGAGCG 
CTGATTATTT CCCGGGGTAT GGGGATTTTT TCCCGTACCC TGGGGATCAC CGGAGCCTGT 
GATGTGGTGG AGTTTCATAA GTCCCGGGAC GGAGTCACCC TTTATGGCCG GGAGGGGACT 
TACCAGCCGG TTCCTGTGGA ATACAAGCGG GGCAAACCCA AGCAGGATAA TGCGGATGTG 
CTGCAGTTAT GTGCTCAGGC CATGTGCTTG GAAGAGATGC TCCTCTGCAC CATACCGGAA 
GGATTTTTGT ATTATGGTGA ACCCAGACGC AGAACGAAAG TTATCCTGGA TGAGGAGATT 
CGGGAGGAAG TCAAAAGGAT TTGTCAAGAG ATGCATGAGC TTTATGCCAA GAGATATACC 
CCTAAAGTTA AAACGACGAA AGCATGCCGA GCCTGCTCCC TCAGTGAAAT CTGTCTGCCC 
AAGCTGTGTA AGAACCCATC GGCCCTGGAC TATATGAAGA AAATGATTGC AGAGATCGAG 
GTTGAGCCAT GA
 
Protein sequence
MEYQEDDFLL LSGIQHYVFC KRQWALIHIE QQWQENFRTI EGAILHEKTH DSTIKEKRGA 
LIISRGMGIF SRTLGITGAC DVVEFHKSRD GVTLYGREGT YQPVPVEYKR GKPKQDNADV 
LQLCAQAMCL EEMLLCTIPE GFLYYGEPRR RTKVILDEEI REEVKRICQE MHELYAKRYT 
PKVKTTKACR ACSLSEICLP KLCKNPSALD YMKKMIAEIE VEP