Gene Dhaf_1960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1960 
Symbol 
ID7258929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp2110202 
End bp2110801 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content46% 
IMG OID643561856 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002458436 
Protein GI219668001 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGAAA ACAGCACAAA ACAGGAAATA TTGAAAACAG CGAAGGACTT ATTTAATCAA 
CGAGGTTTCA ATGCCGTATC TCTGCGCGAT ATTTCAGGCG TCATGGGAAT CAGCAAGGGA 
AATCTGACCT ATCATTTTAA AAAGAAAGAA GACATTATTG AAGCGATCCT TGATGAAATG 
TCCGGTCAGT ACCGGCCTCC GCAAGTTCCC CAATCACTGG GCGAAATGAA CGCTCTGTTT 
ATGCATCTTC AGACGCTGGT GAAAGACAAT GCCTTTTATT TCTGGCACCA TGCCCAGCTT 
GCTCAAGTGT CCCCCAAAAT ACGGGAACAG CAGAGCAAGG TCTATCAAAC CAACACCAAA 
TTGTTCAGGC AGGCCTTTGC TGTCTTCAAT AAAGATGGAG TGCTCCTTGA CGAGCATTTT 
CTCGGTCAGT ATGAACAAAT CATCGACTCC CTGCTGCTGG CCTGCATTTA TTGGATACCC 
TTTGGTGAGT TAAAGCAAAA GGTTGGGCAG CCGGCCACAT TTCAACGGCA GGCCTGGGGG 
TTGCTCTATC CCTTGCTTAC AGAAAAGGGG AAGAAGCTGT TGCAGGAGAT CATAGGATAG
 
Protein sequence
MMENSTKQEI LKTAKDLFNQ RGFNAVSLRD ISGVMGISKG NLTYHFKKKE DIIEAILDEM 
SGQYRPPQVP QSLGEMNALF MHLQTLVKDN AFYFWHHAQL AQVSPKIREQ QSKVYQTNTK 
LFRQAFAVFN KDGVLLDEHF LGQYEQIIDS LLLACIYWIP FGELKQKVGQ PATFQRQAWG 
LLYPLLTEKG KKLLQEIIG