Gene Dhaf_1939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1939 
Symbol 
ID7258908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp2082903 
End bp2083523 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content50% 
IMG OID643561835 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002458415 
Protein GI219667980 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.640559 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTCGTG ACGGAGAACA GACACGGGAA GCTATTTTGA AAAGCGCTCA AGCTGAATTT 
TTGGCCAAGG GCTTCTCCGC TGCCTCGCTG CGCAAGATTG CCACGGGGGC CGAGGTGACG 
ACCGGTGCGC TGTACCGTCA TTTTACAGAC AAGGCCGCCT TATTTGAGGC TTTGGTGGCT 
CCTTGTTTTC ATGGCTTTAT CCAAATGTTC CGGCAGCAAG GGGAGGACTA TCTCCGGGGG 
CAGGACTCCT ATGATTTTGA CCATAACTGG TCTTCCTCGG AGCAAAGTCT GCTGAGGTGG 
ACAGAATATA TCTATGACCA TCTGGAGGTC TTTAAATTGC TCCTCTCGGC AGCGGAAAAA 
ACCGCTTATG AGAGCTTTGT CCATATCCTG ATCGAGATGG AAGTGGATAT GACCTTGGAG 
TATATCCGAC TGGCCCGGGA AAAGGGCTAC ATGATCAAGG ATGTCTCCAG AGAAGTAATT 
CACATTTTTG TTAACGCGCA GTTTTCCGCC TTTTTCGAGA TGGTGCTTCA CGATGTTCCC 
CGGGAGCGGG CTGTGGAGTA TACCAGCAGT ATCTTCCGCT TTTTTGCGGC AGGATGGAAA 
AAACTGTTTA TCGGTGCATA A
 
Protein sequence
MVRDGEQTRE AILKSAQAEF LAKGFSAASL RKIATGAEVT TGALYRHFTD KAALFEALVA 
PCFHGFIQMF RQQGEDYLRG QDSYDFDHNW SSSEQSLLRW TEYIYDHLEV FKLLLSAAEK 
TAYESFVHIL IEMEVDMTLE YIRLAREKGY MIKDVSREVI HIFVNAQFSA FFEMVLHDVP 
RERAVEYTSS IFRFFAAGWK KLFIGA