| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1606 |
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| Symbol | |
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| ID | 7258575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 1715255 |
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| End bp | 1715980 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643561511 |
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| Product | transcriptional regulator, GntR family |
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| Protein accession | YP_002458091 |
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| Protein GI | 219667656 |
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| COG category | [K] Transcription |
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| COG ID | [COG2188] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00000225231 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGAAC TTTTGTACAT TCAATTAGTG GACCAACTAA GAAAAAAGAT TCAGCTGGGC
GTATTAAAAC CTGGCGATAT GCTCCCCTCT GAAAATGAGT TGTCCCAAGA GTACCAGATC
AGCAGAGTGA CGGTAAGAAA AAGCCTGTCC TTATTGGAAC AGGAAGGCTA TACTTATTCT
GCGCCCGGAA AAGGATATTT TGTCCGCGAA CCGGTAACAG ACAAATATAT TTTAAACTTT
AATGAAATGA ATAATGCCGG CGGATCTGCC GCCTCCAGCA AATTATTGGA AGTGAATGTC
GTTCCTCCCA GCACCAAAAT GATGTATGAG TTGCAGATTC CTGACGACCG CTATGTTATT
GTCATCAAGA GACTTCTCTT GGCGGAGGGT GCCCCGATTG CGTACGATGT TAAGTATTTG
CCTTACAACC GTGGCCTGCC TTTGGTCGAA AGGGAAATTA AGTATGCTAC GTTCCCTGAG
TTAGCCGGAA AAAAAACATC CTTGTTTTCG ATTAAGAAGG ATTTGAAAAT CTGCGCTAAA
AATGCTTCCG GAGGAGTATG CCCCTTGTTA AATGTTGAAG AAGGCCATCC CCTGCTGGTC
ATTAGTCAGA AGCTTTATAC TGCTGAAAAT AAGGTAATTG GCTGGGGAGA AATATATTAT
ATCGCTGAAT TTTGTGAACT GAATGCCATG TGGAGCTTTG GGCAAAGGCT GTATGATAAC
GGGTAA
|
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| Protein sequence | MKELLYIQLV DQLRKKIQLG VLKPGDMLPS ENELSQEYQI SRVTVRKSLS LLEQEGYTYS
APGKGYFVRE PVTDKYILNF NEMNNAGGSA ASSKLLEVNV VPPSTKMMYE LQIPDDRYVI
VIKRLLLAEG APIAYDVKYL PYNRGLPLVE REIKYATFPE LAGKKTSLFS IKKDLKICAK
NASGGVCPLL NVEEGHPLLV ISQKLYTAEN KVIGWGEIYY IAEFCELNAM WSFGQRLYDN
G
|
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