Gene Dhaf_1522 details

Gene Information

• Locus tag: Dhaf_1522
• Symbol: aksA
• ID: 7258491
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfitobacterium hafniense DCB-2
• Kingdom: Bacteria
• Replicon accession: NC_011830
• Strand: +
• Start bp: 1622273
• End bp: 1623436
• Gene Length: 1164 bp
• Protein Length: 387 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 643561430
• Product: trans-homoaconitate synthase
• Protein accession: YP_002458010
• Protein GI: 219667575
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0119] Isopropylmalate/homocitrate/citramalate synthases
• TIGRFAM ID: [TIGR02660] homocitrate synthase NifV

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.00000000000249206
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGAGGAAA GAAAATTAAC CATCGTGGAC ACGACATTGC GGGATGGAGA ACAGACCGCA 
GGAGTAGTAT TTTCTAATCA GGAGAAGCTG ATGATTGCCC GGATGCTGGA TGATCTCGGT 
GTCCATCAGA TTGAAGCCGG GGTTCCGGTC ATGGGCGGCG ATGAGCAGAA GGCAATCCGT 
GATATTGTTA AAATGGGTTT GAAAGCCAGT ATTATGGGAT GGAACCGGGC GGTCATAGCC 
GATATTGAAA AATCCATTGA ATGTGGATGC GATGCGGTGG CTATATCCAT TTCCACCTCA 
GATATTCATA TCGAACATAA ACTGATGACC ACACGGGAAG ACGTTTTGGC CAGAATGGTC 
AAGGCTGCTG AATTTGCCAA GAGAAACGGG CTTTACATAT CCGTGAATGC GGAGGATGCC 
TCCCGTTCCG ATCTGGATTT TCTCCTGGAA TTTGCTCGTC AGGCCAAAGA GGCGGGGGCA 
GACCGGCTTC GCTATTGCGA TACGGTGGGG ATCCTTGAGC CTTTCACGAC CTTTGAGCGA 
ATCACGAAGC TCAAAGAAAC CATCGATATC GATGTGGAGA TGCATACTCA TAATGACTTT 
GGTATGGCAA CGGCCAATGC CTTAGCCGGT GTGAAAGCGG GAGCCAGCCA TATTGGGGTA 
ACGGTCAACG GCTTGGGCGA GCGGGCCGGT AATGCAGCTT TAGAGGAAAT TGTCATGGCC 
CTGAAGTATT TGGCCGGAGT CGATCTGAAA TTTGCCACAG AGCGTTTTGT CGAGGTTTCA 
GAGTTTGTAG CGAGAGCGTC AGGACGTTCT GTTCCTGCCT GGAAGGCTAT CGTGGGCAGC 
AATATGTTTG CCCATGAGTC GGGGATTCAC GCTGATGGGG CTTTGAAAAA TCCCCTCACT 
TACGAAGTGT TTAAACCGGA GGAAGTGGGC CTGGAGCGTC AGATTGTGAT TGGCAAGCAC 
TCGGGAACTG CGGCCATCAA AGCTAAGTTC CGCAATGAAT ACGGCAAAGA GATTTCCGAG 
GAAGAAGCCA ATGAGCTGCT GGCCCGGGTA AGAGCTTTTG CTGTGGATAT GAAGCGCTCC 
CTTTTTGATA AGGAGCTCAT GTATATTTAC GAAGATTTGC ATAGGGAAGC GGAAAATCGT 
CAACCTAACC CAAAGTGGTT TTAA 

 

Protein sequence

MEERKLTIVD TTLRDGEQTA GVVFSNQEKL MIARMLDDLG VHQIEAGVPV MGGDEQKAIR 
DIVKMGLKAS IMGWNRAVIA DIEKSIECGC DAVAISISTS DIHIEHKLMT TREDVLARMV 
KAAEFAKRNG LYISVNAEDA SRSDLDFLLE FARQAKEAGA DRLRYCDTVG ILEPFTTFER 
ITKLKETIDI DVEMHTHNDF GMATANALAG VKAGASHIGV TVNGLGERAG NAALEEIVMA 
LKYLAGVDLK FATERFVEVS EFVARASGRS VPAWKAIVGS NMFAHESGIH ADGALKNPLT 
YEVFKPEEVG LERQIVIGKH SGTAAIKAKF RNEYGKEISE EEANELLARV RAFAVDMKRS 
LFDKELMYIY EDLHREAENR QPNPKWF