Gene Dhaf_0505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0505 
Symbol 
ID7257472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp559173 
End bp559889 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content48% 
IMG OID643560424 
ProductABC-2 type transporter 
Protein accessionYP_002457008 
Protein GI219666573 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.0000000955112 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAC TGTTCAGCCT TACCTTCAAA TCGGCAAGCC GGGATCCCTT TTTACTGCTA 
TGGTCGATTT TACTGCCCAT CGGGGGCATG GTTGGGTTAG GAATGCTGAT AAAATCCCCG 
GAATATCCCC AGGGCATCGT AACCGGGATG ATGGCTGTCA GTATTTTGTT TTACGCTTTC 
ACGACCACCT CTTTTGCCAT CCTGGCGCAA CGCCGGAGAG GTGTCTATCA TCTGCTGCGG 
GTGACGCCCC TGCCCCTTTG GCAATATGTA TGCGGCCTAT CAGGCGCCTG GACTTTGATT 
TCTTTTTTAT GTGCGCTGCT TGTATTGTTG TCGGGAGTCT TGGTATTTAA ACTGAATGTC 
TCCCTGCCAT CCTTCCTGGC GATGGTTCCC ATCATCCTTA TTGCAACTCT CAGTTATGTT 
TTCTTCAGTT TTTTTATTGC CGGTCTGAGC CGGTCGGAAA ACAATGTCAG TATTCTGACA 
AACCTGATCA CCATGCCTCT CCTGCTTGGC AGCAGCGCTT TTTATTCCCT GAACAACGCT 
CCGGCATTTA TTCAAACCAT CAACAGATGG AATCCTTTTC AATGGTTCAT TGATGGCCTG 
CGCAGTGCTT TGGATTCAGC ATGGGCCGAC TATTTAACCA GTATGGGACT CATATCCTTG 
GTGGCAATAG CGGCATTGGT GCTGGCCTTG AAAACATTTC GGTATACCGA TGTTTAA
 
Protein sequence
MKTLFSLTFK SASRDPFLLL WSILLPIGGM VGLGMLIKSP EYPQGIVTGM MAVSILFYAF 
TTTSFAILAQ RRRGVYHLLR VTPLPLWQYV CGLSGAWTLI SFLCALLVLL SGVLVFKLNV 
SLPSFLAMVP IILIATLSYV FFSFFIAGLS RSENNVSILT NLITMPLLLG SSAFYSLNNA 
PAFIQTINRW NPFQWFIDGL RSALDSAWAD YLTSMGLISL VAIAALVLAL KTFRYTDV