| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0196 |
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| Symbol | |
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| ID | 7257157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 218984 |
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| End bp | 219991 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 643560110 |
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| Product | Uroporphyrinogen decarboxylase (URO-D) |
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| Protein accession | YP_002456700 |
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| Protein GI | 219666265 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01463] methyltransferase, MtaA/CmuA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.343296 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAATAGTT TACAAAGGCT AGAGGCTGCT CTGGCAGGCC ATGCTTTTGA TGAGGCACTT
TGTATTCCGT TGGTATTTGG CGGGGCAGCT TTTTTAACGG ATGTAAAATT AAAAAGATAT
CTGCAAAACG GAGAAATTTT GGCACAATGT CAATTAGATT CACAGCAGAA GTTCGACTAT
GATGCGGTTT TTGTCTATGG CGATAATTGT ATTGAAGCAG AGGCTTTGGG ATCAAGAGTA
TATTTTCCGG AAAATGCTTA TCCCTATATT GAAAAATATC GACTGGAGGA TCCCAGGCAA
TTAAAAGACT TACCGGATTT CAACCCTTCG ACAGATGGCA GAATGCCGGA GTTGCTGAGG
GCTGTCGCGC TTCTCAAGAC CGAACTGGGA GATAGCCTGC CTATTGCCGG GGTGGTCTTG
GGACCGATGA GCATTGCCAG CCAGTTGATG GGACTGGAAA GACTTTTATA CCTCTTACTT
GATTCGCCTT GTGAATTTGC AGACATAATA AGATTTGCTT CCGGAATCAC CTTAAAAGCC
GGTTTGGCCC TCCTTGCTCA AGGCGCCCAT ATCTCGGCAG TAATCGATCC CAGCGCTTCC
CAAAGCATTC TGCCCAGCGA GATGTTTGGC CGCTATTTAT TACCCACTAT CCGTGATATC
TTCTCCCAAT TCAAAGGGGC GGGGGCGATG GCTTCCTGGT TGGTGATCAC GGGAAACAGC
CAAGGGCTTT TGCCCTACTA TCGCCAATGC GGAGTGGATA TTGCGGGTAT AGATTATGAA
GTGCCGTTGG CAGAAGCACT GAAGTGGGAA GGAGACTTTT TGATATCCGG AAATATTAAA
CCATATCGCT TTGTCAATCA AACACCTCAG GAAATCATCC GTGAAGGCAA AGAGTTAATA
AGTCTGGCAG CCGGCAGGAG GTTTATTTTA AGCTCAGGCT GTGAAGTGCC TTTAGATACC
AAGCCGGAGA ATCTTGCTGC ATTGATTAAG GCGGTTAGGG ATGTGTGA
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| Protein sequence | MNSLQRLEAA LAGHAFDEAL CIPLVFGGAA FLTDVKLKRY LQNGEILAQC QLDSQQKFDY
DAVFVYGDNC IEAEALGSRV YFPENAYPYI EKYRLEDPRQ LKDLPDFNPS TDGRMPELLR
AVALLKTELG DSLPIAGVVL GPMSIASQLM GLERLLYLLL DSPCEFADII RFASGITLKA
GLALLAQGAH ISAVIDPSAS QSILPSEMFG RYLLPTIRDI FSQFKGAGAM ASWLVITGNS
QGLLPYYRQC GVDIAGIDYE VPLAEALKWE GDFLISGNIK PYRFVNQTPQ EIIREGKELI
SLAAGRRFIL SSGCEVPLDT KPENLAALIK AVRDV
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