Gene Dhaf_0142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0142 
Symbol 
ID7257091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp148443 
End bp148829 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content46% 
IMG OID643560044 
ProductRNA binding S1 domain protein 
Protein accessionYP_002456646 
Protein GI219666211 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1098] Predicted RNA binding protein (contains ribosomal protein S1 domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000417569 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCATTG CGGTTGGCAC TATAGTTGAG GGTGTAGTAA CGGGAATTAC CAATTTCGGT 
GCTTTTGTGG AATTACCCGA GAAAGTCACA GGTCTCGTGC ATATCTCAGA AGTTGCAGAT
GCATATGTTA AAGATGTTAG GGACTACTTG AAGGAACAAG ACCGTGTTAA GGTCAAAGTG
ATCCATGTCG ATGAAAAAGG GAAAATTGGT CTATCGATTA AACAGGCTAA TCCGAGCCCG
AAAAATACGA CGCGGGAACG TCGCCAGCCA ACCGTATCCT TTGAGGATAA ATTAGCCAAG
TTTATTAAGG ATAGCGATGA ACGGCAACTG GAATTCCGTC GTGCCACAGA ATCCAAGCGC
GGGGGAAGAG GATCAAGCCG ATACTAG
 
Protein sequence
MAIAVGTIVE GVVTGITNFG AFVELPEKVT GLVHISEVAD AYVKDVRDYL KEQDRVKVKV 
IHVDEKGKIG LSIKQANPSP KNTTRERRQP TVSFEDKLAK FIKDSDERQL EFRRATESKR
GGRGSSRY