| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCG9842_0043 |
|---|
| Symbol | holA_2 |
|---|
| ID | 7169735 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus G9842 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011775 |
|---|
| Strand | + |
|---|
| Start bp | 67410 |
|---|
| End bp | 68381 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 643559205 |
|---|
| Product | DNA polymerase III, delta subunit |
|---|
| Protein accession | YP_002454709 |
|---|
| Protein GI | 218848126 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1466] DNA polymerase III, delta subunit |
|---|
| TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0736782 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTTTAT TTGTAATTTA TGGATTAGAG CAATATACAA TTGATAAGGA ATTAACAAAG
ATTATAAATA AAGACCTAGA AAGCGATAAT ATTGATTTTT CCGTTAATAT TTATGATTGT
GATGAAACTA CAGTTCAAGT TGCTATAGAA GATGCAGAGA TGTTTTCTTT AATGATGGGA
CCTAAAAAAG TAGTTGTTAA GAATGCTCTG TTTCTAACGG GACAGAAAAT GAAAAAAGAT
GAACATGATA TGGATATTTT ACAAAAATAT ATTGAAAGTC CTAACGAGGA TACAGATTTA
ATTTTAGTAG TACCGTATGA AAAATTAGAT CAACGTAAGA AGATAGTAAA GTTATTAAAA
GAAAAGGCAA TAATTATTGA AGCTGCAGTT TTAAAAAGTA TAGAAGCTAA GAGATGGATA
AAAGAAGAGT CACAAAATCT AAATATAGAA TTAAGTTCTG AAGCTATAGA ACATCTATAT
ATGATGGTTG GTTCTAATTT ACAGATGTTA TCCAGCGAAT TACAAAAAAT AGCTATGTAT
GTCGGTGAAA AGCGTAAGGT GGGTACAGAA GTAATACACC TCTTAGTAAA AAAGACTTTA
GAACAGAACG TATTCATTAT TATTGAAAAG ATTGGAAAAA AACTTTATGC AGAAGCTCAT
TCATTTTATA AAGAGCTAAT TATACAAAAA GTTGAAACGA TAGCTATTGC AGCAATGATT
TCTAAGCAAT TTTCTAGAAT GCTAGAGGTT AAAGCGCATT TACATGATGG TGCTGAGCAA
AAACAATTAG CCTCATTATT GGGAGTACAA CCATATGCCG CAAAAGTTAT AGCGAATCAA
GCCAGAGGAT TTCATGAAAC TACAATACAG CAAATACTTC ATCGAATGTC ACAAATGGAC
TATGAATTTA AAACAGGAGC AGATAAACAA TTATTGTTTG AAATGTTCCT TGTTGACTTA
AAGAATCTAT AG
|
|---|
| Protein sequence | MGLFVIYGLE QYTIDKELTK IINKDLESDN IDFSVNIYDC DETTVQVAIE DAEMFSLMMG
PKKVVVKNAL FLTGQKMKKD EHDMDILQKY IESPNEDTDL ILVVPYEKLD QRKKIVKLLK
EKAIIIEAAV LKSIEAKRWI KEESQNLNIE LSSEAIEHLY MMVGSNLQML SSELQKIAMY
VGEKRKVGTE VIHLLVKKTL EQNVFIIIEK IGKKLYAEAH SFYKELIIQK VETIAIAAMI
SKQFSRMLEV KAHLHDGAEQ KQLASLLGVQ PYAAKVIANQ ARGFHETTIQ QILHRMSQMD
YEFKTGADKQ LLFEMFLVDL KNL
|
|---|
| |