| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_3180 |
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| Symbol | |
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| ID | 7175126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 4010942 |
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| End bp | 4011688 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643541716 |
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| Product | beta-lactamase domain protein |
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| Protein accession | YP_002437584 |
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| Protein GI | 218888263 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 85 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGTACC GCATCCACCC CATCGTCATG GGTTCCAAGG TGTTCGACAA GGGCATGATG
ACCTACCAGC ACGACTACGG CACGCCCTAC ACCATCCCCA TCTACACCTG GTACATCGAG
GGCGGCGACA AGCGCATCCT GGTGGACACC GGCGAACTGA ACCCCATCGT CTCGCCCGAC
CGCGAGGCGG CCCTGGGCGG CAGGATATAC ACCTTCGAGG CGGGGCTGGC CAAATTCGGC
CTCACCCCGG CGGACATCGA CGTGGTCATC CACACCCACC TGCACAACGA CCACTGCGAA
AACGACTACA AGTGCGAAAA CGCGGAAATC TGGGTGCACG AAAAGGAACT GGAGTCCATC
CACGACCCGC ATCCGCTGGA TTTCCGCTAC CTTGAAGACT ACATCGCCGA TGTCGAGGAC
AACGGTCAGT TGCGCGTGAT CACCGAAGAA GAGCGCGAAA TCCTGCCCGG CATCCGCGTG
GTGCACACCC CGGTGCATAC CGAGGGCGGC CTGACCGTGT TCGTGGATAC GGAACAGGGC
ACCGCCGCCA TCACCGGATT CTGCATCATC GACGAGAACA TGAATCCGCC CGCCGCCATC
CGGGGCATGG AGATGGAGGT CATTCCTCCC GGCACCTGCA TCAACCCCAA GCAGGGCTAC
GACATCATGC TCAAGGTGAA GGAGCAGGCG GACATCGTCA TCCCGCTGCA CGAACCGCGC
TTTGCCCGCA TGGAGACCAT CGGCTGA
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| Protein sequence | MKYRIHPIVM GSKVFDKGMM TYQHDYGTPY TIPIYTWYIE GGDKRILVDT GELNPIVSPD
REAALGGRIY TFEAGLAKFG LTPADIDVVI HTHLHNDHCE NDYKCENAEI WVHEKELESI
HDPHPLDFRY LEDYIADVED NGQLRVITEE EREILPGIRV VHTPVHTEGG LTVFVDTEQG
TAAITGFCII DENMNPPAAI RGMEMEVIPP GTCINPKQGY DIMLKVKEQA DIVIPLHEPR
FARMETIG
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