Gene DvMF_1053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_1053 
Symbol 
ID7172954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand+ 
Start bp1290225 
End bp1290806 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content60% 
IMG OID643539565 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002435476 
Protein GI218886155 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones91 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGCG ACACCATTCT GCTTACCGCC GCCAAGCTGT TTGCCGAGCG CGGGTTCAAC 
AACACCCCCA CCAGCCTCCT CGCCAAGGAG GCGGGCGTGG CGGAAGGCAC CATCTTCCGT 
CATTTCAAGA CCAAGGACGA CATCTTCCTC ACCCTGATCC GCAACGTGAA GGATCAGCTC 
ATCAGCGACA TCGAGAAGTA TCTCGAGGTG CGCGCCCCCG AAACCAGCGT GGAGAAGGTG 
GTCTCCATCA TCAAGTCGTT CTACGTGTTC GTGAAGAAGA ACCGCATGGA GTTCTGCCTG 
ATCTTCCGCG ACGCGCCCAC CCGCTACGGC GAACGGAACG ATGACGTGTT CCTGGCCATC 
AAGGAAATAT ACTCCTACCT CAACGAGTAC CTGCTGGTGG CACTGCGCGA CGGCCAGCGT 
GACGGCTCGG TGCGCACCGA CATCAACGTC GAGGACACCG CGTGCATGAT CGTGGGCATC 
ATGGTGGGCA TCGTGCGCAC CATCCACTTC CAGTTCGTGG AACCCACCGA CGATCTGCTG 
CGCAACGTCA TCGACAACGT CAGCCGCTTC CTGAAGCCGT AG
 
Protein sequence
MKRDTILLTA AKLFAERGFN NTPTSLLAKE AGVAEGTIFR HFKTKDDIFL TLIRNVKDQL 
ISDIEKYLEV RAPETSVEKV VSIIKSFYVF VKKNRMEFCL IFRDAPTRYG ERNDDVFLAI 
KEIYSYLNEY LLVALRDGQR DGSVRTDINV EDTACMIVGI MVGIVRTIHF QFVEPTDDLL 
RNVIDNVSRF LKP