Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_0913 |
Symbol | |
ID | 7172802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 1098632 |
End bp | 1099375 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643539413 |
Product | Rhomboid family protein |
Protein accession | YP_002435336 |
Protein GI | 218886015 |
COG category | [R] General function prediction only |
COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 0.0106896 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCCCCC TGCGCGACAC CATTCCCCGC GTGCACACCC CCTGGGCGGT GTGGTGCATT CTTGCCGCCA ACCTGGCCAT ATTCCTGTGG CAACAGACGC TGACGCCCGG CGAAACCCTG CGCCTGTTCC ACTTCATGGG GGTGGTGCCC GCCCGCTTCG CCCACCCGGA CTGGGCGCTG ACCTCCGGCT ACCCGCCGGG GGGCTTCATC GCCTTTGTCG CGCACATGTT CCTGCACGGC GGCTGGGGCC ACTTTCTGGT GAACATGTGG ACGCTGTGGA TCTTCGGCGA CAACATCGAA GACGTCATGG GGCCGGTGCG CTTCACGATA TTCTACCTGA CCTGCGGGCT GGCGGCGCTG CTGACGCACA TGGTCTTTTC CGCCTCGTCC ACGGTGCCGG TGGTGGGGGC GTCCGGGGCC ATCGCCGGGA TGCTGGGCGG GTACTTCCTG CTGTATCCGC ACGCGCGGGT CACCACGCTG GTGCCGCTGC TGTTCATCCC GCTGATCTTC GACCTGCCCG CCGTGGTCTA CCTGGGCATC TGGTTCGTCA CGCAGCTGCT GTCGGGTCTG TCTTCCCTGG GCAGCGACGG CGCGGGCATC GCCTGGTGGG CGCATCTGGG CGGCTTCGTG GCCGGGTTCG TGCTGCTGCC GCTGTTCCGC CAGAAGGGGC GCTGCTACTA CTGCCATTTT CCGGAGGGCC GGGGCCGGGG CGTCATCCGG GCGCCGCACG ATCCCGAGGC ATAG
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Protein sequence | MFPLRDTIPR VHTPWAVWCI LAANLAIFLW QQTLTPGETL RLFHFMGVVP ARFAHPDWAL TSGYPPGGFI AFVAHMFLHG GWGHFLVNMW TLWIFGDNIE DVMGPVRFTI FYLTCGLAAL LTHMVFSASS TVPVVGASGA IAGMLGGYFL LYPHARVTTL VPLLFIPLIF DLPAVVYLGI WFVTQLLSGL SSLGSDGAGI AWWAHLGGFV AGFVLLPLFR QKGRCYYCHF PEGRGRGVIR APHDPEA
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