Gene DvMF_0553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0553 
Symbol 
ID7172440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp652895 
End bp653716 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content65% 
IMG OID643539053 
ProductCBS domain containing protein 
Protein accessionYP_002434978 
Protein GI218885657 
COG category[R] General function prediction only 
COG ID[COG1253] Hemolysins and related proteins containing CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.000116003 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
TTGGACGGAG AATCGGGCAG TCCCATCTGG TCGCGCATCA CGCGGCTGTT CCAGAACCGC 
ACCGGCGACA CGGTGGAGCA GGCCATCATC GAAGCCCGCG AAGACGGCGA ACTGGACGCC
GAAGAAGGCT CGATGCTGCT GAACATCCTG AGCCTTGACG ACACGCAGGT TCAGGACATC
ATGACCCCCC GCACCGACAT CGACTGCGTG GAGGTGGACA ACTCCCTCGG AGAGGTCATC
GAGCGCATCG TCGCCTCCGG GCATTCCCGC ATCCCCATCT ACCGCGACAA CCGCGACAAC
ATCGTGGGCG TGGTCTACGC CAAGGATCTG CTGCGCTGCT TCGTCGACCC CACCGGGTGC
GCAACCCCGG TGGCCGAACT TATGCGCGAG CCGTACTTCG TGCCGGAAAC CAAGAACGTC
TACGAACTGC TCCAGGAATT TCGCGGTCGC AAGAACCACA TGGCCATCGT GCTCGACGAG
TACGGCGGCA CTTCCGGCCT CGTGACCATC GAGGACGTGC TGGAACTCAT CGTGGGCGAC
ATCGAGGACG AGCACGACGC CCCGCGCGAC GAGGACATCG TGGTCCTTGA CGGCGAAAAC
TACCTGCTTT CCGGGCGCGC CCTGCTGGAA GACCTGGAAG AACTGGGCAT CAGCCTGGAT
TCGGACGAGG TGGACACCAT CGGCGGCTAT CTCAGCATGC TGGCGGGCCA CGTGCCCCAG
GCTGGCGAGA CGTTCGAACT GGCCGGGCGC CGCTTCGAGG TTGCCGAGGC CGACGCCAAG
CAGATCCGCA CCGTGCGCGT GGGGCCGCTG GACGCAGCCT GA
 
Protein sequence
MDGESGSPIW SRITRLFQNR TGDTVEQAII EAREDGELDA EEGSMLLNIL SLDDTQVQDI 
MTPRTDIDCV EVDNSLGEVI ERIVASGHSR IPIYRDNRDN IVGVVYAKDL LRCFVDPTGC
ATPVAELMRE PYFVPETKNV YELLQEFRGR KNHMAIVLDE YGGTSGLVTI EDVLELIVGD
IEDEHDAPRD EDIVVLDGEN YLLSGRALLE DLEELGISLD SDEVDTIGGY LSMLAGHVPQ
AGETFELAGR RFEVAEADAK QIRTVRVGPL DAA