| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0540 |
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| Symbol | secF |
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| ID | 7172427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 635182 |
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| End bp | 636267 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643539040 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_002434965 |
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| Protein GI | 218885644 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 0.0258314 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTTTCT CGTTCATCCG GCATGATACC AATTACGACT TCGTGGGCAT GCGCCACAAG
GCGTACGTGA TTTCCATCGT GCTCATTCTC GTGGGGCTGC TCTCCATCGT CTTCAAGGGC
GGGCTGACCT ACGGCATCGA CTTCGCGGGC GGGGCCATCG TGCAGGTCAA GTTCGACCGG
CCCGTGGCCG ACGATACCCT GAAAAAGAGC CTGGAAAGCG CCAGCCTGCC CGGTCTTGCC
GTGCAGCGCT TTGGCGAAGG CGAAACCGAC TACCTCATCC GCATTTCGCA TTCCGATGAA
TCGGCCGAGG CCATCCGCAC GGCTGTCACC GGTGCTCTCA CCGCCAACAT CAAGGACGCC
ACGTTCGAGG TGCAGCGGTT GGAAATGGTC GGCCCCAAGG TGGGCGCGGA CCTGAAGAGC
AAGGCTGTGG AGGCGCTGTA CTACGCCGTG CTGCTCATCG CCATCTACAT CTCCGGGCGG
TTCGAGCGGC GCTGGATGGC GTCCGCCGTC ATGGCGGGCA CCCTGGCGGG CGGCATGTAC
CTGCTGGGCC TCGTCGGCGT GCCCCGGCTG TGGCTGGTGC CGTTCTCGCT GGTCCTCACG
CTGGTGCTGT GCTGGAAGCT GCGGCTCAAC TTCGCCCTGG GGGCCATCGT GGCCCTGGTG
CACGACGTGC TCATCACCAT GGGTGTGCTG TCCCTGCTGA ACAAGGAAGT GGACCTGAAC
ATCGTGGCGG CCATCCTGAC GCTGGTGGGC TACTCGCTGA ACGACACCAT CATCGTCTAT
GACCGCATTC GCGAAACGCT GCGCACCCAC CGCAAGGAAT GGACCTACGC GCATATCATC
AACGCCAGCA TCAACCAGAC GCTCAGCCGC ACCATCCTGA CGGGCGGCAC CACGCTGGTG
GTCATCCTGG CGCTGTACGT GCTGGGCGGC GGGGTCATCC ACGACTTCGC GCTGACCATG
CTGGTGGGCG TGTTCGTGGG CATCCTGTCG TCCATCTTCG TGGCAAGCCC GGTGCTGCTG
CACTTCGGCA TGCCCGAAGA GGAAAAGGAA CCCGCGCCGC GTGTCGGACA GGAAGGGGCC
GTGTAG
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| Protein sequence | MGFSFIRHDT NYDFVGMRHK AYVISIVLIL VGLLSIVFKG GLTYGIDFAG GAIVQVKFDR
PVADDTLKKS LESASLPGLA VQRFGEGETD YLIRISHSDE SAEAIRTAVT GALTANIKDA
TFEVQRLEMV GPKVGADLKS KAVEALYYAV LLIAIYISGR FERRWMASAV MAGTLAGGMY
LLGLVGVPRL WLVPFSLVLT LVLCWKLRLN FALGAIVALV HDVLITMGVL SLLNKEVDLN
IVAAILTLVG YSLNDTIIVY DRIRETLRTH RKEWTYAHII NASINQTLSR TILTGGTTLV
VILALYVLGG GVIHDFALTM LVGVFVGILS SIFVASPVLL HFGMPEEEKE PAPRVGQEGA
V
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