Gene DvMF_0247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0247 
Symbol 
ID7172127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp280410 
End bp281201 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content60% 
IMG OID643538742 
Productflagellar hook capping protein 
Protein accessionYP_002434672 
Protein GI218885351 
COG category[N] Cell motility 
COG ID[COG1843] Flagellar hook capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value0.00661658 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAGCCA GCCCCGTACT CGGTCAGGCC GAGCAGACGT TCAACAACTA CCTTGGCGCC 
AAGACCAAGA ACGATGAACT GGACAAGCAG GCGTTCCTGA ACCTGCTGGT GGCCCAGCTT
AGCCATCAGG ATCCGCTGAA CCCCATGGAC GACAAGGAAT TCGTCGCCCA GTTGGCGCAG
TTCACCAGCC TTGAACAACT CACCAACATC TCCACCGGCA TCACCGACCT GAACGCCAGC
GCCAAGCAGC AGCAGATGTC CGCCGCAGTG GGCTACATCG GCAAGGAAGT GACCGCCAGC
GGCTACGAGA TCAGCAAGAC CTCGCAGAAG GACAGCACCG GCGCGACGGT CAACTCCGTC
AGCACGGTGT ACTTCACGAC GCAGGAACAG GTGAGCAACG GCTACATCAA CATCTACGAC
AGCCAAATGA ACCTGGTGCG CACGGAACTG ATGGGCGCGA AGCAGCCCGG CACCTACCAG
TACAAGTGGG ACGGCAAGGA TTACCAGGGC ACCATAGTTC CGGACGGTGT CTACGCGGTT
GCCATGTACG GCGAAGGTAC GGACGGCAAG TCCGTGTACA TCACCACCCA GGTTTCCGGC
CAGGTGTCGG GCGTGGTCAA GGTGGACGAC GAACCCTACC TGAGCCTGGC GGACGGCCGC
CACATAGCCT TCAGCAACGT CTCCGAAATC GTGGCGCCCA ACACCAACAC CGGCGGCAGC
GACACGGAAG ACGACAATTC CGGAGATGAT TCCGGAGATG ATTCCGGCAG CGGCACGGAA
GGCGACAGCT AA
 
Protein sequence
MAASPVLGQA EQTFNNYLGA KTKNDELDKQ AFLNLLVAQL SHQDPLNPMD DKEFVAQLAQ 
FTSLEQLTNI STGITDLNAS AKQQQMSAAV GYIGKEVTAS GYEISKTSQK DSTGATVNSV
STVYFTTQEQ VSNGYINIYD SQMNLVRTEL MGAKQPGTYQ YKWDGKDYQG TIVPDGVYAV
AMYGEGTDGK SVYITTQVSG QVSGVVKVDD EPYLSLADGR HIAFSNVSEI VAPNTNTGGS
DTEDDNSGDD SGDDSGSGTE GDS