Gene AFE_2979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_2979 
Symbol 
ID7137046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp2670125 
End bp2670943 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content62% 
IMG OID643531330 
ProductWbbD domain protein 
Protein accessionYP_002427346 
Protein GI218666092 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGGATG CCAACTTTTA TCGTGCCTTT GAAGACCGCC ACCGGGGCAC GCGGGACCTG 
ATCAAATCCC GCGTGCGGGC GTATCTGCCT TTCATTACGC CTTTGCTGAA GCTCTATGGC
GAGGGCGCCG TGCTGGACAT GGGTTGCGGG CGCGGGGAGT GGCTGGAACT CATGGGCGAA
GAGGGATTCA CCGCCCATGG CGTCGATCTG GACGCGGCTA TGCTGGCAGC TTGTCAGGAG
CTCGGGCTCT CCGTGGAGCA GGGCGATGCC CTGGAGGCAC TCAAGCGTCT GCCGGATGCC
AGCCAGTGCG TGGTCTCCGG TTTCCATATT GCCGAGCATG TGCCCTTCGC GGTGCTGCAG
GAAATGGTGG CGGAGGCACT GCGTGTGCTG AAACCGGCGG GGCTGCTGAT CCTGGAAACA
CCCAATGCGG AAAACCTCGT AGTCGGTGCT TCCAGCTTTT ATCTCGACCC TACCCATCAG
CGCCCTCTCC CGCCTTTGCT GCTGTCCTTT TTAACCGAGT ATGCCGGGTT CTCGCGCACC
AAAATCCTGC GGTTGCAGGA GTCATCGGAG CTAGCCGCGC ACAGTGCGCG CGTGACGTTG
CTGCAGGTGC TGGCGGGCGT CAGTCCCGAT TACGCCGTCG TTGCCCAGAA AACAGCTTCT
GCAGAGGAGC TGGCGCACTT CAGCGCGCCC TTTGAACAGG AATACGGCCT CACGCTGGCA
GCCTTGGCGG CGCGCTACGA AACGGATTTA CGGGCGGAGA TTTTGCGAGA ACTGAAGCCT
CCGCGCAAAA AGGCGGCAAG CGCCGCCCCC AAAAAATAG
 
Protein sequence
MPDANFYRAF EDRHRGTRDL IKSRVRAYLP FITPLLKLYG EGAVLDMGCG RGEWLELMGE 
EGFTAHGVDL DAAMLAACQE LGLSVEQGDA LEALKRLPDA SQCVVSGFHI AEHVPFAVLQ
EMVAEALRVL KPAGLLILET PNAENLVVGA SSFYLDPTHQ RPLPPLLLSF LTEYAGFSRT
KILRLQESSE LAAHSARVTL LQVLAGVSPD YAVVAQKTAS AEELAHFSAP FEQEYGLTLA
ALAARYETDL RAEILRELKP PRKKAASAAP KK