Gene AFE_1133 details

Gene Information

• Locus tag: AFE_1133
• ID: 7134132
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: +
• Start bp: 1012629
• End bp: 1013108
• Gene Length: 480 bp
• Protein Length: 159 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 643529529
• Product: hypothetical protein
• Protein accession: YP_002425604
• Protein GI: 218667679
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG1335] Amidases related to nicotinamidase

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.0774875
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAAGA AGGGGTTACT GATCGTCGAT CTGCAAGAGG GCTTTGCTCC CTCGCCCCTC 
CTCGTTGATC GTATTCGCGA ATTATCACTG AATTATCCAG TAATAGCCAT GACGCGATTC 
TCTAACCAGG TTGGAAGCTT GTTTCGATTA GTCCTTGGAT GGAATGGCGA TGGCGGCGCA 
CTCTGTCTGG ACCTTCCGAG TGCAACCACG CTGGAGAAAA CCGGCTATGG GCTTACAGCA 
GAACACCTGG AAATATTGAA AGATATTGGA TGTACGGAAT GGCATATTTG TGGCTTGGAA 
ACGGATGCTT GCGTTCTGGC CTGCGCATTC AGTCTTTGGG ATGCAGGTCT TTGCCCCGTT 
GTCTTGCTCG ACCATTGTCA ATCTCCGCTG TCCGATGAAG TTGGAAAAAT CATCCATCGC 
CAGTTTGGGC AAAACCAAAC AACGAAAAAC CGAGGTAATT TCGACCATGT CCAAGCGTGA 

 

Protein sequence

MAKKGLLIVD LQEGFAPSPL LVDRIRELSL NYPVIAMTRF SNQVGSLFRL VLGWNGDGGA 
LCLDLPSATT LEKTGYGLTA EHLEILKDIG CTEWHICGLE TDACVLACAF SLWDAGLCPV 
VLLDHCQSPL SDEVGKIIHR QFGQNQTTKN RGNFDHVQA