Gene Mchl_5193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_5193 
Symbol 
ID7116233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp5557673 
End bp5558857 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content73% 
IMG OID643527886 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002423883 
Protein GI218533067 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.380622 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGTG ATGCAGGGGG CGACCGCGCC CTTTCTCCGA CGACGCGCAT CGGGCTCACC 
TTGATCGCGG GTGGGGCTGT CGCCAACATC TACTACAATC AACCTCTGCT CGCGGTCCTC
GTCGCCGAAT TCGGCGAGCG GGCGGCCCTG CTCGTGCCCA CCGCCAGCCT CGTCGGCTAC
GGCCTGGGCA TCCTGTTCCT CGTGCCCCTG GGCGATGCCC TGCCGCGGCG CGACCTGATC
GTGTGGCAGT TGCTGGGGCT GGCCGTCGCC TTGGTCGTCG CCGCGCTCAG CCCGAATCTC
GCCGTGCTCG CGGCGGCGAG CCTCGTCATC GGCGTGCTCG CCTGCGCCGC GCAGCAGGCG
GTGCCCTTCG CCGCCGAGCT TGCGCCCGAT GCAAGCCGGG GACGAATCGT CGGCGGCGTG
ATGACCGGCC TCCTCTCCGG CATCCTGCTC GCCCGCACCG CGAGCGGCTT CGTCGGCGCG
CAGTTCGGCT GGCGCGCGGT GTTCTTCGCC GCGGCCGGCC TCGCCGTCGC CATGGCGGGG
GTCGCGTGGC GCACGCTGCC GCGCAGCGCA CCGAAGCAGC GCCTGCGCTA TCGCGCGCTG
ATGATCTCGC TGCTGCATCT CGTGCGCAGC CAGCCGATCT TGCGCAACGC CAGCCTGTCG
CAGGCCCTGC TGTTTGCCAG CTTCAACGCG TTCTGGGCGA CGCTGGCCCT CCTCGTCGAA
GCGCCGCCCT TCGACCTCAC CGCGGCGGGC GCGGGCCTGT TCGGCGTCAT CGGCGTGGCG
GGCGCGCTGA TCGCTCCCTA TTCCGGCCGC TACAGCGACC GGCGCGGCGC CCGGCCGGTG
GTGATCGTCG GCAGCGTCCT GGTCGCGGCG GCCTTCGCGG TGCTGGCACT GGCCGGTGAG
GTGTCGCTCC TCGCCATCGC GGCAGGCGTG CTGCTCCTCG ACATTGGCAT CAACGGCGCG
CTGATCGCCA ACCAGACCCG CGCCTACGCC CTCGCGCCGG GCGCCCGCGG GCGCATCAAC
ACCGTGCTGT TCACCGCCGT CTTCATCGGC GGGGCGGCCG GCGCCTTCCT CGGCTCGCGC
GCCTTCCTCC TCGCGGGCTG GCCCGGCGTC TGCGCCGTCG GCGGCGCCTT TGCGCTTGCC
GCGCTGGCCG TGTCCTGGCT CGGCGGTAGA ACCCAGCCTA CTTGA
 
Protein sequence
MSRDAGGDRA LSPTTRIGLT LIAGGAVANI YYNQPLLAVL VAEFGERAAL LVPTASLVGY 
GLGILFLVPL GDALPRRDLI VWQLLGLAVA LVVAALSPNL AVLAAASLVI GVLACAAQQA
VPFAAELAPD ASRGRIVGGV MTGLLSGILL ARTASGFVGA QFGWRAVFFA AAGLAVAMAG
VAWRTLPRSA PKQRLRYRAL MISLLHLVRS QPILRNASLS QALLFASFNA FWATLALLVE
APPFDLTAAG AGLFGVIGVA GALIAPYSGR YSDRRGARPV VIVGSVLVAA AFAVLALAGE
VSLLAIAAGV LLLDIGINGA LIANQTRAYA LAPGARGRIN TVLFTAVFIG GAAGAFLGSR
AFLLAGWPGV CAVGGAFALA ALAVSWLGGR TQPT