Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_4957 |
Symbol | |
ID | 7107023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | - |
Start bp | 5506265 |
End bp | 5507677 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 643483169 |
Product | O-antigen polymerase |
Protein accession | YP_002380179 |
Protein GI | 218441850 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
TIGRFAM ID | [TIGR00947] probable bicarbonate transporter, IctB family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCAG CCTGGAAACG AATAACTCTT ATGGAATTAT CCCCTAGTCA GTGGCGTGGG GCCAGTTTCG TCTATCATTT TGTCGGTTTT TTAAGCCGTT GGCGTTCTGA AAGTTGGCTG CTTCAGTGGG CAGAACCTTT AGGCGCTCTA CTCATTTGCT TGGTTTTGGC TTTAAGTCCT TTTGTTTCTA CCGGGTTAAT CGGGATTTTG CTGCTAGCTT GTGGCGGATA TTGGCTTTTA TTGACTTTAT CCGATGATGA TTGGCCGTCT ATCACTCCGA TTCACCTTCT TGTTCTCCTT TATTGGGGAA TTGCTACCAT TGCGGTCGCT TTTTCGCCGG TAAGAGCCGC CGCTTTTGAG GGTTGGGTTA AACTGACTTT ATATTTAGTC ATGTTTGCTC TGACGGCTCG TGTCTTGCGA TCGCCCCGTC TGACTTCGAT GATCATTACT GTATATTTAT TAACCGCTTT GGTGGTGAGT ATTTATGGGG TGCGACAGGA AATGTTCGGG GTTGAACAGT TAGCGACTTG GAACGATCCC ACCTCAGATT TAGCAGGGGA TACGCGAGTT TATAGCTATT TGGGTAATCC TAATCTCTTA GCGTCCTACT TGTTACCGGC CATTGCTTTG AGTGCGGCGG CGGTATTTGT TTGGCAGGGG TGGCTACAGA AAGCATTAGC ACTAACTTTG TTTTTTGTCA ATACGGCCTG TTTGTACTAT ACCGATAGTC GAGGCGGTTG GATTGGCATG ATGGGTCTTT CTCTCGTTTT TCTGCTGTTG CTCTATTATT GGTTTAAAGA TAGCCTTTCT CCCTTTTGGC AAAAGTGGTT ACTTCCCCTG GTTTTGGGAA CTCTCGCCGC CTTTGTAATC CTGGCTATGA TTATGGTAGA ACCCCTGCGG ATTCGGGTAA TGAGTATTTT TGCCGGACGA GAAGACAGTA GTAATAATTT TCGGATGAAT GTTTGGGCTT CCGTGATTAA AATGATTAAA GCTTATCCAA TTATTGGGAT TGGCCCGGGC AATGAAGCGT TTAATAAAGT TTATCCTCTG TTTATGCACC CTAAATATAG CGCTTTGAGT GCTTATTCGG TGTTGCTCGA AATTATGGTA GAAACCGGTG TAATTGGGTT AAGTTGTTTT GTGTGGTTAT TAGTCGTCAC CTTTAACCAG GGAGTGCGTC AAATAGGACT GTTACGACAG CAAAGAAATC TTCAGGGGTT TTGGTTAATT GCTGCGATCG CCACTATGGC CGGAATGTTA GCTCATGGTT TTGTCGATAC GGTGTGGTAT CGTCCCCAAA TTGCTTCCCT ATGGTGGCTG ATGGTGGCTC TCATTGCCAG TCATTATTCC GGAGTAATAC CTAAAAATTC GCCAAAAAAA GTTAAAGACG GGCTTTCATC GCACCGCCTC TAA
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Protein sequence | MTSAWKRITL MELSPSQWRG ASFVYHFVGF LSRWRSESWL LQWAEPLGAL LICLVLALSP FVSTGLIGIL LLACGGYWLL LTLSDDDWPS ITPIHLLVLL YWGIATIAVA FSPVRAAAFE GWVKLTLYLV MFALTARVLR SPRLTSMIIT VYLLTALVVS IYGVRQEMFG VEQLATWNDP TSDLAGDTRV YSYLGNPNLL ASYLLPAIAL SAAAVFVWQG WLQKALALTL FFVNTACLYY TDSRGGWIGM MGLSLVFLLL LYYWFKDSLS PFWQKWLLPL VLGTLAAFVI LAMIMVEPLR IRVMSIFAGR EDSSNNFRMN VWASVIKMIK AYPIIGIGPG NEAFNKVYPL FMHPKYSALS AYSVLLEIMV ETGVIGLSCF VWLLVVTFNQ GVRQIGLLRQ QRNLQGFWLI AAIATMAGML AHGFVDTVWY RPQIASLWWL MVALIASHYS GVIPKNSPKK VKDGLSSHRL
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