Gene PCC7424_3703 details

Gene Information

• Locus tag: PCC7424_3703
• Symbol: rplC
• ID: 7110212
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 7424
• Kingdom: Bacteria
• Replicon accession: NC_011729
• Strand: +
• Start bp: 4135666
• End bp: 4136304
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 643481933
• Product: 50S ribosomal protein L3
• Protein accession: YP_002378952
• Protein GI: 218440623
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0087] Ribosomal protein L3
• TIGRFAM ID: [TIGR03625] 50S ribosomal protein L3, bacterial

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 66
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGTCAGTTG GTATTTTAGG TACAAAACTG GGCATGACCC AAATCTTTGA CAAAGAAACG 
GGAATTGCCA TACCCGTAAC CGTCATTCAT GCCGGTCCAT GTCCAATCAC CCAAGTTAAA 
ACCCCAGCAA CAGATGGATA CAACTCCATC CAAATCGGTT ACGGGGAAGT CAAAGAAAAA 
GCCCTCAACA AACCTAAATT AGGGCATTTA AAAAAATCGG CATCAACACC TGTCCGACAT 
CTTAAAGAAT ATCGATTAGA AAATGCAGCC GACTATCAAC TCGGCGATGG AATTAAAGTT 
GATCTATTTA AACCGGGTGA TTTAGTCGAT GTTGCTGGTA AAACCATAGG ACGAGGGTTT 
GCCGGCTATC AGAAACGTCA TAACTTTAAA AGAGGGTCAA TGACTCACGG GTCTAAAAAC 
CACCGCTTAC CCGGTTCAAC GGGAGCAGGA ACAACCCCCG GACGGGTTTA TCCGGGTAAA 
AGAATGGCGG GACGATACGG CGGAACTCAA GTCACCATCC GTAAACTAAC CGTTGTGCAA 
ATAGACACCG AACGGAATTT AATCTTAATT AAAGGGGCTG TACCCGGCAA ACCCGGCAAT 
CTATTAAGTA TTACACCAGC CAAAACCGTT GGAAAATAG 

 

Protein sequence

MSVGILGTKL GMTQIFDKET GIAIPVTVIH AGPCPITQVK TPATDGYNSI QIGYGEVKEK 
ALNKPKLGHL KKSASTPVRH LKEYRLENAA DYQLGDGIKV DLFKPGDLVD VAGKTIGRGF 
AGYQKRHNFK RGSMTHGSKN HRLPGSTGAG TTPGRVYPGK RMAGRYGGTQ VTIRKLTVVQ 
IDTERNLILI KGAVPGKPGN LLSITPAKTV GK