Gene PCC7424_0008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_0008 
Symbol 
ID7112206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp8189 
End bp8887 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content36% 
IMG OID643478288 
ProductABC exporter ATP-binding subunit, DevA family 
Protein accessionYP_002375350 
Protein GI218437021 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID[TIGR02982] ABC exporter ATP-binding subunit, DevA family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAATA ATAACCCAGT AGTAGATATT AATCATTTAA ATCATTATTT TGGTGAGGGA 
GCGTTAAAAA AGCAAATTTT ATTTGATATT CATCTAACGC TTTTACCGGG AGAAGTGGTT
ATTTTAAAAG GCCCTTCCGG ATCAGGAAAA ACAACTTTAT TAACCTTAAT GGGAGGATTG
CGATCGGCAC AATCCGGAAG TTTAAAAGTA TTTGGTAAAG AAATTGTAGG GGCAAAAAAA
CATAAATTAA TTCAAATTAG ACGCAATATC GGCTATATTT TTCAAGCTCA TAATTTACTG
GATTGTTTAA CAGCAAGGCA AAATGTTCAG ATGTCTCTTG AATTGCATCG AGGACTAGGT
GATCGGGAAA TTAAACACAG ATCGATCGCT ATGTTAGAAT CAGTAGGATT AGGCGATCGG
GTTAACTATT ATCCGCGCAA TCTTTCAGGA GGACAAAAAC AACGGGTTGC CATTGCTCGC
GCTTTAGTTA GTCGTCCTAA AATGGTCTTA GCGGATGAAC CGACAGCATC GTTAGACAGT
AAATCGGGTC ATGATGTAGT CGTATTAATG CAGAAATTGG CAAAAGAACA AGGGTGTACT
ATTTTAATTG TTACTCATGA TAACCGAATT TTAGATGTAG CGGATCGAAT TGTAGAATTA
GAAGATGGGC GCTTAAAGCA AAATCAACTC ATTATTTAA
 
Protein sequence
MMNNNPVVDI NHLNHYFGEG ALKKQILFDI HLTLLPGEVV ILKGPSGSGK TTLLTLMGGL 
RSAQSGSLKV FGKEIVGAKK HKLIQIRRNI GYIFQAHNLL DCLTARQNVQ MSLELHRGLG
DREIKHRSIA MLESVGLGDR VNYYPRNLSG GQKQRVAIAR ALVSRPKMVL ADEPTASLDS
KSGHDVVVLM QKLAKEQGCT ILIVTHDNRI LDVADRIVEL EDGRLKQNQL II