Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_41511 |
Symbol | |
ID | 7199342 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011699 |
Strand | - |
Start bp | 47977 |
End bp | 48773 |
Gene Length | 797 bp |
Protein Length | 227 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185510 |
Protein GI | 219130728 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0285567 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTCA CTTCTTCCAT TGTCCTGCTG AGTGCGCCTT TCCTGGCCTT GATTGGGTCG GCATCAGCGT TTTTACCACC GACGCCAGCT TTTGCGCGGT CAGCCTCAAG CTTGTCCGTC GCTGTGGACA CATCCGATAT TAAGAATGGA CTAACCGTCG AGATTGACGG CGAACCTTAC AAGGTACTGA ACTTTTCCAT CATGAAACAG GCCCGAGGTG CTGCCAAGAC GACCATCAAG TTTAAGAATT TAATGCGGGG CACTACCATT GAGAACACAT ACCGAAGCGG AGAAAAGTTC GAAACGGCCT TGATTGAAAA GATTGGCGCA CAGTTTACTT ACTCAGAAGG TGTACGTACC TACTTTACAT AAAGCCGATG GCGATAATTA TGATTTTGGA CGTGTGGTCT GGCCTGGTTC TCACAAAGTC TTGTCTGACA AACACAATCT CTCCAATACT GCAGAACACA TTCTTTTTTA TGAATTCGGA AACATTCGAG GAAATTCCCG TCAGTGACAA GGTAGTCGAC GATAAAGTCA AATGGATTAC GGAGGGCAGC GAAATTTCTC TAGTACTTTT CAAAGATAAA ATTATTGAGG TCGTTGTCCC CTCGACGGCT GTCTACGAAG TCGTCGAAAC CGAGCCCAAC ATGAAGGGCA ACACAGCTCA GGGCTACACC AAGCCTGCAA CCCTTTCCAG TGGAGCCGTG ATTAGTGTAC CTGGCTTTGT GGAACAGGGA GCCAAAATTA AGGTTGACAC CGACAAGGGA GAATACATTG AGCGTGTAAA CGAATAG
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Protein sequence | MKFTSSIVLL SAPFLALIGS ASAFLPPTPA FARSASSLSV AVDTSDIKNG LTVEIDGEPY KVLNFSIMKQ ARGAAKTTIK FKNLMRGTTI ENTYRSGEKF ETALIEKIGA QFTYSEGNTF FFMNSETFEE IPVSDKVVDD KVKWITEGSE ISLVLFKDKI IEVVVPSTAV YEVVETEPNM KGNTAQGYTK PATLSSGAVI SVPGFVEQGA KIKVDTDKGE YIERVNE
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