Gene PHATRDRAFT_41511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_41511 
Symbol 
ID7199342 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011699 
Strand
Start bp47977 
End bp48773 
Gene Length797 bp 
Protein Length227 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185510 
Protein GI219130728 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0285567 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTCA CTTCTTCCAT TGTCCTGCTG AGTGCGCCTT TCCTGGCCTT GATTGGGTCG 
GCATCAGCGT TTTTACCACC GACGCCAGCT TTTGCGCGGT CAGCCTCAAG CTTGTCCGTC
GCTGTGGACA CATCCGATAT TAAGAATGGA CTAACCGTCG AGATTGACGG CGAACCTTAC
AAGGTACTGA ACTTTTCCAT CATGAAACAG GCCCGAGGTG CTGCCAAGAC GACCATCAAG
TTTAAGAATT TAATGCGGGG CACTACCATT GAGAACACAT ACCGAAGCGG AGAAAAGTTC
GAAACGGCCT TGATTGAAAA GATTGGCGCA CAGTTTACTT ACTCAGAAGG TGTACGTACC
TACTTTACAT AAAGCCGATG GCGATAATTA TGATTTTGGA CGTGTGGTCT GGCCTGGTTC
TCACAAAGTC TTGTCTGACA AACACAATCT CTCCAATACT GCAGAACACA TTCTTTTTTA
TGAATTCGGA AACATTCGAG GAAATTCCCG TCAGTGACAA GGTAGTCGAC GATAAAGTCA
AATGGATTAC GGAGGGCAGC GAAATTTCTC TAGTACTTTT CAAAGATAAA ATTATTGAGG
TCGTTGTCCC CTCGACGGCT GTCTACGAAG TCGTCGAAAC CGAGCCCAAC ATGAAGGGCA
ACACAGCTCA GGGCTACACC AAGCCTGCAA CCCTTTCCAG TGGAGCCGTG ATTAGTGTAC
CTGGCTTTGT GGAACAGGGA GCCAAAATTA AGGTTGACAC CGACAAGGGA GAATACATTG
AGCGTGTAAA CGAATAG
 
Protein sequence
MKFTSSIVLL SAPFLALIGS ASAFLPPTPA FARSASSLSV AVDTSDIKNG LTVEIDGEPY 
KVLNFSIMKQ ARGAAKTTIK FKNLMRGTTI ENTYRSGEKF ETALIEKIGA QFTYSEGNTF
FFMNSETFEE IPVSDKVVDD KVKWITEGSE ISLVLFKDKI IEVVVPSTAV YEVVETEPNM
KGNTAQGYTK PATLSSGAVI SVPGFVEQGA KIKVDTDKGE YIERVNE