Gene PHATRDRAFT_50384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_50384 
Symbol 
ID7199200 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011697 
Strand
Start bp188059 
End bp189160 
Gene Length1102 bp 
Protein Length269 aa 
Translation table 
GC content55% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185288 
Protein GI219130263 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGATGAACAT CAGAGACTTT CGTTCCCAGT AAAGTCTCCT CTTCTCGTAC TATCCGTATC 
GGACACAGAA CGTACACACC AGCTAAAAAG AGCCTCTCAA CAACTGTAAG GCTTGAATTG
GGCTATCCAC CTCTGCTGTT ATCTCTACGG AGTTGTCCAT CATGATCCAA TTTCCTTTCT
TCTCCACGCT TCTGCTTTTC TCCGCCACGA CGGCCTTGAC CGTTCTACCG TCTGAGTCTG
GTTTCCGTCC AGAAACTTCC ATTTCACGGC GCGTCGTATT GGCGACCCTG CTTGGAACTG
CCGCGGCGAC CCCGTTTGCG GCGCAAGTCG CCCACGCCGC GGACGACGAA GCGGTGTACT
TTGGCGCCGG CTGCTTTTGG CACATGCAGC ACGAATTCAT CCAGGCCGAA CGGGATCTGT
TAGGCCGGGA CCTCGATACT CAGCTCTCCG CCACGGCGGG CTACGCCGGT GGGACCAAGA
CGGATGGACA AGGACGTGTG TGCTACCACA ATTTTCAGAA CGTGGCCGAT TACGGACGAC
TCGGACACGG AGAAGTGGTC GGATTGACCT TGCCATCGGA CAAAATTGCC GAATTTGGGA
AAGTCTACTT TTCCTTGCTG GATCCGAAGA CAAAAGGTGC GTAGTTGCGG GTTTGCTGCG
CGAGCAAAAG GACAAACTTT TCGTGAACCG TAGCGTTGCC CCCCACCGTG CCCATCCTTC
TAACCATTCA AATGTGCGCG TAACTTGTCA CAAAACCCGG CACCTAGACC GCGTCGATCC
CATGGACCGG GGAGCGGAAT ACCGTTCACT TTTGGGTTTG CCGGGTGGCA CGTCTCACCC
GGCTTATCCC GGCATTCAAG AGGCTGCCGA AGCCGCCGGC GTCACTTTGA AACGAGGCCA
AGGCAACGAT GGTGATACGC TCGGTAAGAA GCTCGTCTGG GTCTACGATA CGCAGACTTT
TCCATTCTAC CAGGCCGAGG TGTATCACCA ATATCACAAC GATTTTCAAA GTGCCCCGTA
CGGCAAAGCC TACAACCAAA TGGGAAGCCA AGCCTTTGAG GACGGTCGTT TGAAGTTGAC
GGGTTGCCCG GATCGGGTGT AG
 
Protein sequence
MIQFPFFSTL LLFSATTALT VLPSESGFRP ETSISRRVVL ATLLGTAAAT PFAAQVAHAA 
DDEAVYFGAG CFWHMQHEFI QAERDLLGRD LDTQLSATAG YAGGTKTDGQ GRVCYHNFQN
VADYGRLGHG EVVGLTLPSD KIAEFGKVYF SLLDPKTKDR VDPMDRGAEY RSLLGLPGGT
SHPAYPGIQE AAEAAGVTLK RGQGNDGDTL GKKLVWVYDT QTFPFYQAEV YHQYHNDFQS
APYGKAYNQM GSQAFEDGRL KLTGCPDRV