| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_16891 |
|---|
| Symbol | |
|---|
| ID | 7199152 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011697 |
|---|
| Strand | - |
|---|
| Start bp | 186197 |
|---|
| End bp | 187546 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002185337 |
|---|
| Protein GI | 219130364 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACGG GGGGTATGAG TCTCTCCAAA GAATTCTTCG AACTCCTCAA GGCCATCGGC
GAGTCCAAAT CCAAGCAGGA AGAAGACCGG ATCGTTCAGA AAGAAGTGAC GCGCTTGAAG
AGCAAACTCG AAAACACACC GGGGAATCCT TACCACTCCA ATACGTTGCT CACCAGCAAG
AAGCGCGCCA AGGAGTTCCT GGTGCGACTT TTGTACGTGG AAATGCTCGG TCACGACGGA
TCCTTTGGAT ACATCAAGGC CGTCGAAATG GCCGCCTCGG CCTCGCTTTT TCACAAGCGT
ACCGGCTATT TGGTCTGTGG CGCCTGTCTC CCGCCCTCGC ACGAATTCCG TTTCATGCTC
GTCAACCAAA TGCAACGCGA TCTACAGTCC ACCAACGTAC TTGAATGCAG CGGTGGTCTC
CTCGCCTGTA CCAACCTTAT TACGGCTGAT ATGGTCCCCG CCGTCGCCAA CGAAGTTAGT
AAACTGCTGC AGCACGATTC AGCGACCATT CGCAAAAAGG CGATTCTCTG TCTGCATCGA
TGTCACCAAC TCGCGGATGA CGTTGTTACC AGCGAATCTC TGCACGAATC GCTACGGAAA
CTTGTTTGTG ATAAGGACCC TTCCGTGATG GGGAGTTCGC TGAATGTCAT TGAGGCCTTG
TCTCTCACGA ATACCGCGCC TTTCAAAGAC CTGGTCCCCT CCCTCGTTTC CATTCTCAAA
CAGATTTGTG AACACCGGTT GCCTTCCGAG TTTGACTACC ACCGTGTCCC GGCGCCGTGG
ATGCAACTTA AACTCGTACG CATTCTGGGT CTCCTCGGCA AGGCCGACAT GCCCGCGAGC
AAGGGGATGT ACGAAATTCT ACACGAAACG CTGCGCAAGG CCGATACCGG GATCAATGCG
GGATACGCGA TTGTTTACGA ATGCGTTATT ACCATTATTG CCATTTATCC CAACGCCAAC
CTGTTGGACG CCGCAGCCGA AGCCATTGCT CGCTTCATGC AGTCTCGATC GCACAATCTC
AAGTACCTAG GAGTTACCGG ATTAGCCATG ATTGTGGAAC AGCATCCACA GTACGCGGCG
CAGCATCAGT TGGCCGTGAT GGATTGCTTG GAAGATGACG ACGAAACGCT ACAGCGAAAG
ACGCTCGATC TATTGTACCG CATGACGAAC GTAGTTAATG TGGAATTTAT CGCCGAAAAG
CTGGTGGAAT TCTTACGCCA CACGACCGAT TTATTCCTCA AACAGACCTT GACGACCCGT
GTTTGTTCCA TTGCCGAGCG CTACGCCCCC AACAACGCCT GGTATATTCG TACCATTACC
TCTCTGTTGG AAGTATCTGG AGACATGGTT
|
|---|
| Protein sequence | MATGGMSLSK EFFELLKAIG ESKSKQEEDR IVQKEVTRLK SKLENTPGNP YHSNTLLTSK
KRAKEFLVRL LYVEMLGHDG SFGYIKAVEM AASASLFHKR TGYLVCGACL PPSHEFRFML
VNQMQRDLQS TNVLECSGGL LACTNLITAD MVPAVANEVS KLLQHDSATI RKKAILCLHR
CHQLADDVVT SESLHESLRK LVCDKDPSVM GSSLNVIEAL SLTNTAPFKD LVPSLVSILK
QICEHRLPSE FDYHRVPAPW MQLKLVRILG LLGKADMPAS KGMYEILHET LRKADTGINA
GYAIVYECVI TIIAIYPNAN LLDAAAEAIA RFMQSRSHNL KYLGVTGLAM IVEQHPQYAA
QHQLAVMDCL EDDDETLQRK TLDLLYRMTN VVNVEFIAEK LVEFLRHTTD LFLKQTLTTR
VCSIAERYAP NNAWYIRTIT SLLEVSGDMV
|
|---|
| |