Gene PHATRDRAFT_50148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_50148 
Symbol 
ID7198849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011695 
Strand
Start bp194929 
End bp196062 
Gene Length1134 bp 
Protein Length377 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184986 
Protein GI219129629 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCGCA GCAGGATCCT TGTTTCACTC CGACGGACGC TCGTAGTATA CATTTTTGGC 
CTACTCTGGT CCTGTGTTTC CGCGCTTGGA AGGCCAGCGT ATATAGTTGC TACCGACAGG
AGACCGAGCT GTATCTTTCC TTCGACAAGT CTTCGTCATT TTGCCGCTCC AATCAATCTT
GCGGATGTTG GAGTGTTCAA TATTCCGGGG AGCGATCCCG AACGACCCAG AAAGGTAAAT
CAAGATCGTC ATTTTTTGTT TCAGAACGAC GAAACGATCG TGGTGGGAGT GATGGATGGG
CATGGAAAGG ACGGCCACAA ATTGACAGAG TTTCTTGCCA CACAACTTCC CTTTCGCTTA
AAAGAAAGCT TAAACAGTAG CACACTGAAC AAATCCGACC ATGCGGCCTT ACGGGAAATG
GAAGAAAGGC TCGTGACTTT GGGGAAAGCG AAATCCACCT CCATGAGCGA GGAGCACGAT
GTCGTTTCTG GTGCTTTGAT CCAGGCTTTT CACCTTGCTC ACCATGATGC ATGTCAGAAT
ACTGCAGTCC CCGCCGGTAG ATCGGGAACC ACTTGTGTTG CATGTGTCGT CACCGATGAT
TCTATTGTAA CGGCCAGTGT CGGAGACTCC ACGCTTATTT TAGGTTTGTA TGCCGCTCCC
GACGTAGCTG CGGAAGGATA CGTTCTTTCC ACGGAAGTTC TATCTGTTCG CACAACCGTT
CAAATTGAAG GAGAAAGATC AAGAATCCAA GCAGGAGAGG GACGTGTGGA TGGAAATGGG
AATGTCTTCT ATGGACCTGT AGGAATCGCC ATGACAAGAG CCTTGGGCGA CGCTGTCATG
CTTCGAGCAG GAATTTTGCC AACTCCAATG ATCCGAAATT TCAATCGGCC TGTGAGTCAC
GCCCAAGAGG AAACTGGTGA AATTTTGTCC ATGATTGTTC TCGGGAGTGA CGGAGTGTTT
GACGTAATGA CGAAAGAGGA CGTTATACAA TTGGCCGGCC AAGTTATACA GGAGTTTGAA
TCGACTAAGA CTGCCGCCGA AGCCATTTGT AACGAAGCCA GGCGACGATG GCTAGCAAAC
TTGCCGATAG AACCGAAGGT GGATGATATA ACCTGCGCAG TAGTTCAGAT ATAG
 
Protein sequence
MIRSRILVSL RRTLVVYIFG LLWSCVSALG RPAYIVATDR RPSCIFPSTS LRHFAAPINL 
ADVGVFNIPG SDPERPRKVN QDRHFLFQND ETIVVGVMDG HGKDGHKLTE FLATQLPFRL
KESLNSSTLN KSDHAALREM EERLVTLGKA KSTSMSEEHD VVSGALIQAF HLAHHDACQN
TAVPAGRSGT TCVACVVTDD SIVTASVGDS TLILGLYAAP DVAAEGYVLS TEVLSVRTTV
QIEGERSRIQ AGEGRVDGNG NVFYGPVGIA MTRALGDAVM LRAGILPTPM IRNFNRPVSH
AQEETGEILS MIVLGSDGVF DVMTKEDVIQ LAGQVIQEFE STKTAAEAIC NEARRRWLAN
LPIEPKVDDI TCAVVQI