| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49988 |
|---|
| Symbol | |
|---|
| ID | 7198772 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011694 |
|---|
| Strand | - |
|---|
| Start bp | 43966 |
|---|
| End bp | 45504 |
|---|
| Gene Length | 1539 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002184881 |
|---|
| Protein GI | 219129407 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAAGA ACCAATTCGT TCGCGGTTAT CTGTCCTATG TGCCAATCGC TGTTTGTGCG
CTGTACCTCG TTGCATCGCC TGCGAAACTG GTAGCGGCTC ACAGTCAATG GAAGGTGCAG
AATAGGCATC GTCAAACGAA ACTGTATGAA TCAAGCAAAA GTCCTGCAGC CCGCAGCGTC
ATAGCAGATC TACGCGGAGG TTCACAGCCA AGGCACTCCT CTGCGGATGT CCGAGAAATT
AATTCTACTC TAGATTTCAC CAACCCTTCC CTGATAGAAG AGGGACCCCA TTTAAACGCG
TTGGATTCAC AGTCAGAAGC AGATCGGTTA CGGAATCTGG ATTTGAATAC ATCGGCAGCT
CTGCCAATTC CGGCATGGAG GGAGCATTTG CCTCCACCGC TGCGTCTAAA GAAAAATACA
TTGCAACGAG TCCGGATAAA GAACGTTGAG ATCTTCTTGT TGGGCACGGC ACACGTTTCC
AGCGATTCTA GCGAGGAAGT TAAACTTCTG CTCCGTCATG TGCATCCCGA CGCTATTTTC
GTTGAGCTTT GTGAAGCTCG CATACCTCTT CTTGAAGGAA CTGCGAAGGA CGAACACGAA
GAAGAAGCAT TGGCACACCA GAATCGCACG ATGCGTGAAA AGATACGGCA GGTACAGTCC
ACACAGGGAG GCTCCCGTCT TCAAGCTCTT TCCACAGTTT TGTTGACTTC TGTCCAAGAA
GACTATGCAT CCGAGTTGGG AGTAGAGCTG GGAGGCGAAT TTCGGGCCGC ATACCAATAC
TGGCAAGCGC AACAATCCAT ACCGACTGGA ACAAGTTCTC AATCTTGTGC TTTGATTTTG
GGCGATCGTC CTCTACAATT GACACTTGTA CGTGCCTGGG AGTCTCTCGG GTTTTGGCCC
AAGGTAAAGG TTTTGCTAGG TCTGCTTTGG AGCTCATGGC AAAAGCCGAA AAAGGAGGAA
ATCCAGGAGT GGCTACAGTC TGTGCTTCGG GACGAAACAG ATGTTCTCAC GGAAAGTCTG
AAAGAACTGC GCCGTCATTT CCCTACCCTT TTCACAGTAA TTATTGCAGA ACGTGATGCA
TGGCTAGCTG CCAAGCTTGT ACAAAGCTGT CGAGTATTAT CGGCCTCAGC AACAGCAGCT
TCTCCTGTAT GCACGGTCGT GGCCATCGTT GGTGCTGGAC ATATCCCGGG AATTGTAGCC
TGGCTGACCA CGCCTCCAGC CGATACGTCT ATCACGCCTG AAACAGTACT ACGCGACTTG
GTCACCACAA AGCGTTGGGC TCACGATGAC GCTATCCAAT TGCAAGCTAT CCCGGCGTGG
ATTTACGAAG TTTCTCACTT GCAGCCCAGT GCCTCGTAAA AAAACACGCC GGCGCGATGC
GAAATGCTTG GATGATACCT TCAACTTCGG AAGGGCCTCC TTTGCCCTTT TGTCTAATCA
ACTGATAAAC CTTTCTGACT ACCGCTTTTG ATCATTGCGA GGGAGATTGG ATTGGCTTTG
CAAAGCTTAA TCTAGTGTCA AACTTTAAAA TATCATCTC
|
|---|
| Protein sequence | MGKNQFVRGY LSYVPIAVCA LYLVASPAKL VAAHSQWKVQ NRHRQTKLYE SSKSPAARSV
IADLRGGSQP RHSSADVREI NSTLDFTNPS LIEEGPHLNA LDSQSEADRL RNLDLNTSAA
LPIPAWREHL PPPLRLKKNT LQRVRIKNVE IFLLGTAHVS SDSSEEVKLL LRHVHPDAIF
VELCEARIPL LEGTAKDEHE EEALAHQNRT MREKIRQVQS TQGGSRLQAL STVLLTSVQE
DYASELGVEL GGEFRAAYQY WQAQQSIPTG TSSQSCALIL GDRPLQLTLV RAWESLGFWP
KVKVLLGLLW SSWQKPKKEE IQEWLQSVLR DETDVLTESL KELRRHFPTL FTVIIAERDA
WLAAKLVQSC RVLSASATAA SPVCTVVAIV GAGHIPGIVA WLTTPPADTS ITPETVLRDL
VTTKRWAHDD AIQLQAIPAW IYEVSHLQPS AS
|
|---|
| |