| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49601 |
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| Symbol | |
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| ID | 7198211 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011691 |
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| Strand | + |
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| Start bp | 165315 |
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| End bp | 167231 |
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| Gene Length | 1917 bp |
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| Protein Length | 465 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | |
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| Product | alanine glyoxylate aminotransferase |
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| Protein accession | XP_002184315 |
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| Protein GI | 219128218 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000836807 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTTTCCTACC GTACCAACAT CCAAATATCG ATCGACACCT ACATACATAC ATCTTATCAA
TCTGTATTGC ATTGTTGTTG GATTGACAGT CAAGGTTGAT TCACAGTCAA GATTGATATC
ATCATACTGA TCATTCGTTT TGTATTGATC AATCTTTCGA CGAACGACTG TGACGTTGAT
TGATTCATTC CTTGTTCGAC TTGACGACTA CTTTTACCAC AGTATGTTTC GATCGGTTGC
TTCTTTGGCG TTGCGCGGTA GTATTGGTAC TGGACGAGGC GTTGCACAAA GCCCGCGCGT
CGTACCGTTC GGATCGGCCG TCACGGTACG CCATTCCAGT AACAGTCACA CGAACAGTAG
TAGTCACACG CCGGAACGCT TGCGGTACAA TGTCATTCCC AAGTCAGACT TTGGAGCCTT
TAAGGAATAT TCCGTCATTC ACACGGACCG GTCCTTGAAT CTCATGAGTG ATCCCTTTCA
ACGCGTCATG CGGGATCTTA ACGAACTACT CAAGGTCACC TACAATGCTG ATAAGGTTGT
CATCCTACCC GGGTACGTAC AGTTGTGAAT GTTGTGTAGG TTTAGGGTGT GTATATCTGT
GTGTCTAGTT GTGTGTATTT GTGTAGTGTT GTTCCAGGTT GGTGGTGTGC AAAGTGAACT
CTGGGACCGT GACTGATTAT CGCACCATTG CGACCCCAAC CCTCACTTAT ATATCATTCC
CCACTGCAGA TCCGGTACGT TTGGCATGGA AGCCGTAGCT CGTCAGTTTG CACAGAACGA
ACACGTCATG GTCATTCGCA ACGGTTGGTT CTCCTACCGC TGGACCGAGA TTTTCGAAAT
GGGGTCGTCC GAACCCGGGG TGGAAGCCGG AGGTGTCGGG GCCGGCATTC CCACGTCCCA
CACCGTCCTC AAGGCCCAAC CCGTACCCGT CCCTGGGAAC GACACGGGCA GCAGCAACAC
CAAAACGACA CACTTTGCCC CGCATCCCAT TCAAGACGTG GTCTCACGGA TTCATCAGGA
ACGACCCGCC GTCTTGTTCG CTCCCCACGT CGAAACATCC ACCGGTATGA TGCTTCCCGA
CGAATACATA CAAAAGGCCG CCCAAGCCAT GCACGACATT GGTGGACTCT TTGTCCTCGA
TTGCATCGCC TCCGGAACCG TATGGGTCGA CATGAAGGCG CTTGGGGTGG ACGTGCTCAT
CTCCGCACCG CAAAAGGGAT GGACCGGTCC ACCCTGCGCC GCACTCGTCA TGATGAGCGA
CCGAGCCGTC GCCCGCATGT CACAAACCTC CGAAACATCC TTCAGTATGA GTCTGAAACG
ATGGGCCGCA CTCATGGACA CGTACGAAAA GGGCGGATTC GCCTACCACA CCACCATGCC
CACGGATGCC CTCCGCGATT TTCACGAAAT ATCCGTCGAA ACCTTGCGTT TCGGTCTACC
CGAACTCAAG ACGGCACAAT TGAATTTGGG ATGGTGGGCT CGTGGTACCC TCGATCGCAA
GGGTCTCGTC TCGGTAGCCG CACCCGGATT CCAAGCACCC GGTGTGCTCG TTTACTACAG
TCCCTCGCAA ACCGACAATC CCGTCATGAT GAGCTCCTTT AAGGCGCAGG GACTCCAAAT
TGCCATGGGC GTGCCTTGGA AAATTGACGA ACCGGAAGGC CTCAAAACCT TCCGCATTGG
ACTCTTTGGA TTGGACAAAC TGGGCAAACC CGACGAGACG ATTCGTGTCA TGGAAGAAGC
CTTGGATCAG GTTTTGGACA GTGTGGGGCA CACGGCCAAG AGCAAAAAAG TGGCCTAGAC
ACATGCAGGT GTGGGTCGCG TCTCCACTCC ATGTTTTCCA TTCCCACGGT GTGCACCCTC
TTGTCTCCTA CTATGTATGA ACTACCATAA GCACTAGACG TTTCTGCTTT TTTTCTA
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| Protein sequence | MFRSVASLAL RGSIGTGRGV AQSPRVVPFG SAVTVRHSSN SHTNSSSHTP ERLRYNVIPK
SDFGAFKEYS VIHTDRSLNL MSDPFQRVMR DLNELLKVTY NADKVVILPG SGTFGMEAVA
RQFAQNEHVM VIRNGWFSYR WTEIFEMGSS EPGVEAGGVG AGIPTSHTVL KAQPVPVPGN
DTGSSNTKTT HFAPHPIQDV VSRIHQERPA VLFAPHVETS TGMMLPDEYI QKAAQAMHDI
GGLFVLDCIA SGTVWVDMKA LGVDVLISAP QKGWTGPPCA ALVMMSDRAV ARMSQTSETS
FSMSLKRWAA LMDTYEKGGF AYHTTMPTDA LRDFHEISVE TLRFGLPELK TAQLNLGWWA
RGTLDRKGLV SVAAPGFQAP GVLVYYSPSQ TDNPVMMSSF KAQGLQIAMG VPWKIDEPEG
LKTFRIGLFG LDKLGKPDET IRVMEEALDQ VLDSVGHTAK SKKVA
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