Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_16065 |
Symbol | |
ID | 7198212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011691 |
Strand | - |
Start bp | 170199 |
End bp | 170954 |
Gene Length | 756 bp |
Protein Length | 252 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184411 |
Protein GI | 219128419 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCGTC AAATCAATCA GCCCATCAAC CAAGTCCGAC TGACTAATGT AGCAGTCGTG CGGTTTAACA GGTCGGGCCG ACGCTTCGAA ATCGCTTGTT ACCGCAACAA GGTAATGGAT TTCCGCGCGG GTCTGGAGAC GGATCTTTCG GAAGTACTAC AGACAGATCG GATCTTTACC AACGTTTCGA AAGGAGAATT CGCTAAAACC AAAGACCTCG AAAAAGCCTT TGGTACACAC GACGAGGAAG CGATCGCCAA GATTATCTTG GAACAGGGCA ACAGTCTGCA GGTATCAGAT CTGGAACGTA ATCAACAGAT TCAAAATACA TTGAGTCAAA TCGCGACGTG GGTGGCCAAC AACTGCGTTC ATCCTGACAC CTGTCGACCG TATACAGTTT CACAAATCAA ACACGTATTG CAAAAAAATT ACGCAGTTCA GACTCACAAG GCAATCAAGC GACAATATTT GGATGCAGTC AAGTTTTTGA AAGATGTGAT TCCTATTGAG CGTGCCAAGA TGGAATTGTC GCTACAATAC GCACGCGGGG AAGAGTCGAT GGTGGAGGAA GGTCTCAAGG ATATTCCGCA TCGTCTTATT AAAGAGTCAA ACGATTCCGC TACGCAGTCG TCCGTTTTCA TATTACAGGT GGATCCGTCC ATGTACCGAG CACTAGATGA ACTTGCCAGT CGGCTTCAAA GTGGGAAACT AGAGATTCTC CAGCAAGTCG TTACTCAACA AGGAAATGTC GAGCTG
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Protein sequence | MSRQINQPIN QVRLTNVAVV RFNRSGRRFE IACYRNKVMD FRAGLETDLS EVLQTDRIFT NVSKGEFAKT KDLEKAFGTH DEEAIAKIIL EQGNSLQVSD LERNQQIQNT LSQIATWVAN NCVHPDTCRP YTVSQIKHVL QKNYAVQTHK AIKRQYLDAV KFLKDVIPIE RAKMELSLQY ARGEESMVEE GLKDIPHRLI KESNDSATQS SVFILQVDPS MYRALDELAS RLQSGKLEIL QQVVTQQGNV EL
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