Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_16052 |
Symbol | |
ID | 7198205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011691 |
Strand | + |
Start bp | 141165 |
End bp | 141977 |
Gene Length | 813 bp |
Protein Length | 271 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184312 |
Protein GI | 219128212 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.032394 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GCCCAGAACG TGACCAACGT GACAATTACC GGTGGTGGAG TTCTGTACGG GAATGCCGAG CACTATATAT CATACTATGA TCCACGCTAC AATCGATTCG AACCAATTGA TCCCGATCCT CGACGACCGC GATTGTTGCT CATCAACGAA AGTTCGTACA TCAACGTACA CTATCTGTCG TTGCAGAACT CTTCCGACTG GACTCTGCAC ATACGTAACA GTGAACACGT GACGGTGCAC AAACTCCGTA TTTACGGAGA CCGTCGCTTT CCGAATAATG ACGGCATTGA TCCCGACAGT TCCTCGCACG TGCATATTTC CCATTGTGTC ATTGACGTGG CCGACGACGG CGTGTGCCCC AAGGCACGCG ATTCCACTCG CGTTCTGCAC AATTTGACCG TCACGAATGT TCTCATTCGA TCCCGCAGTC ACGCCATCAA GTTTGGCTCA CACACGGACG CCAACATGAC CGACATTTTG TTCGAAAACA TTACGATCCT TGACAGCAAC TCCGGATTGG CGATTCAACA GCGGGGTCCG GGGAATATCG ACAACGTCAC CTTTCGTAAC ATTTTTACGG AAACCCGGTA CGACAATCCC AGATGGTGGG GGAACGGCGA GTGGCTCACC ATGACGAGCG AGCCTCGGAA CGAAGGCGAC ATAATCGGCA AAGTTACTAA CTTGCGGTTG GAAAACGTTC GTGCTGTGAG CGAAAATGGT GGCTTACTGA GTGGCCGTGG CTCGGGTATG CAAAACGTTT CCATGACTAA CATACAAGTA ACGATTCGAC CATGGAGCAA TTACAGCAAC GGC
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Protein sequence | AQNVTNVTIT GGGVLYGNAE HYISYYDPRY NRFEPIDPDP RRPRLLLINE SSYINVHYLS LQNSSDWTLH IRNSEHVTVH KLRIYGDRRF PNNDGIDPDS SSHVHISHCV IDVADDGVCP KARDSTRVLH NLTVTNVLIR SRSHAIKFGS HTDANMTDIL FENITILDSN SGLAIQQRGP GNIDNVTFRN IFTETRYDNP RWWGNGEWLT MTSEPRNEGD IIGKVTNLRL ENVRAVSENG GLLSGRGSGM QNVSMTNIQV TIRPWSNYSN G
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