Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_40124 |
Symbol | |
ID | 7195797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011690 |
Strand | + |
Start bp | 214454 |
End bp | 215491 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184084 |
Protein GI | 219127733 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.277877 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATGCAT TCCGGCCCCC ATGGTTGCTG ATGCCAATGA TTGCCGTCCT GTGTTCTAGA GTCCACTCGT TTAGCCACGC TTTTCCAGTG CACGGCTTTC GCCAACTAGT ATTTTGTAGT CACTGTCAGT TGGCGTTCGC AAAAACGTCT GGCGGAGAAA TCACGGATTC ATACCACGGG ATCTCATGCA ATATGGGAAC AATATCAGTA CGACGAATGC TACCTAACGC CACAATATTA GAGTTCGATA TAGCCTACAA GCTCTACCGC CCATCGTCGC TGTCATCTCG TCAAGCGGCT CCAATCGTTG CCTTACACGG AGGACCGTCA GTGCCATCAA ATTACTTACT TCCTTTGGTA CGGATTGTTC CGTACCGATC CATATTATTC TACGATCAGC TCGGGTGCGG TACCAGCGAC GAGCCGAAGG CCGATGACGG TATTTATTCA GTAGGTAACG CAGTCGGCGA TCTCGAAGTA TTACTGAAGC ATCTTGGTGT CCGGCGATTT CACTTGTACG GACAATCCTT TGGTGGCATT CTGGCGTATG AATTCTTGAA ACGCCAAGCG AGCAAAGAAG TGGACGACGG TATCGCCGGG GAAGGATGCC GATCAGTAAT TTTATCGTCC ACTCCGACGA ACGTGATGCA GATCGAAGAC GAAGCCCGAA GCCTGGTCGA GAAACTGGAC AGTCCAGATT TGTTCCGCGA AACGCACCAG CGTCGGATCT CTCCAATGCC ACAGGCTTTG ACGGACGCGT ACGCCTATGC GGGAACGGCG TGGAGGGGTA CCGGAGCGAT TGCCGACTAT AAGGCGACAC CTCCATCAGC AAACAGTCGC AAACTACGAA GCGCGTTAGT ACTGCGGGGA GAACACGATT TTGTCACTGA AGTATGTGTG GCAGATTGGA AACGTTCGCT GTGGAATACG CCGTATGTAC GGGAACGAGT TCTCGATGGT TGTAGCCACC ACGGATTGCT CGAGAATGGA CCCTTGTATG GAGAGATTGT CGACTCCTTT TTTACCGAAT ACGATTGA
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Protein sequence | MHAFRPPWLL MPMIAVLCSR VHSFSHAFPV HGFRQLVFCS HCQLAFAKTS GGEITDSYHG ISCNMGTISV RRMLPNATIL EFDIAYKLYR PSSLSSRQAA PIVALHGGPS VPSNYLLPLV RIVPYRSILF YDQLGCGTSD EPKADDGIYS VGNAVGDLEV LLKHLGVRRF HLYGQSFGGI LAYEFLKRQA SKEVDDGIAG EGCRSVILSS TPTNVMQIED EARSLVEKLD SPDLFRETHQ RRISPMPQAL TDAYAYAGTA WRGTGAIADY KATPPSANSR KLRSALVLRG EHDFVTEVCV ADWKRSLWNT PYVRERVLDG CSHHGLLENG PLYGEIVDSF FTEYD
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