| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49142 |
|---|
| Symbol | |
|---|
| ID | 7195610 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011689 |
|---|
| Strand | + |
|---|
| Start bp | 42217 |
|---|
| End bp | 43185 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002183798 |
|---|
| Protein GI | 219127138 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGCTG CGCCAGCGTT CACAGAATAT CTTGTAATTG GGCTCGACCC AGAATTACGG
AAAGTATGGT ATGCGTTGAT TGTTGCCTTA ACTTATACAA GCAAGATGTT TGAAGTGCAT
CGTCGAGCCG TGGCACTTTC GCTAAGCGGA GCCGGGCATC TACTGCCTTA CCACGCTGGT
GTTTGCCAGG AGCTTCTGAA TTTCGCCAAA ACCCAAGGAC AACGAGTACC TCTGGAAATA
GCTGCGCTAT CTGGTAGTAG TTCGGGTGCC ATTGTAGCCG CTGTCGCCGC ATTCGCGCCA
TCGCAATTGG AGTCGCTTGC TCTTGATTTC ATCCAACAGC GCGGGCGAGG TCTGTCACTT
TTACAAGAGA CTTTGGAGAA TCATCAGACA TCTCAACAAT CCGACCAATT CACGAACAAG
CAAACGCCAC TGTCACAAGG ACAGCCTGCA TTACAAATTT ACACCACACA GTGTCGGAGT
GGTGAACCCT ATGCGTTTTC TTTTTCTTCG TATTCTCCCC TGCTGTTGGA TGCAATTAGA
GCGTCTTGTC ATGTTCCGAT CTCGTTCCAC CCCGTCGATA TGATATCTTG GTCACCATTG
TCGCTGCCGT TGACGTTTGC GGATTCGGAA GGAGTCCTAA TCCATGAGGA AGCCTACGTG
GATGGAGCGA TCGCATCACC CGCGCCCCCA ACTCCACACC AGCTGACGCG TGTCGTAGTA
TCACCCATCA GTGGTGGTGT CGGTACACTG GATTCCGACC AATGGCGCAT TAGCCCCCAC
GACACATCCT GGAGGATAGG TAGTGTAACC TTGAAAGGAT CCTTTCCGGT TCGATTGTCA
ACGCAAAATC TCCGTGCTTT GCGCACCTCC GTGGGAGCAA CTTCGTCGGC CGAGCTGGAA
CGATGGTATC AACTTGGTTT GGATGATGGT CGAAGATTTT GCGAAGACTG GGAAAAAATA
GGTGCATAA
|
|---|
| Protein sequence | MRAAPAFTEY LVIGLDPELR KVWYALIVAL TYTSKMFEVH RRAVALSLSG AGHLLPYHAG
VCQELLNFAK TQGQRVPLEI AALSGSSSGA IVAAVAAFAP SQLESLALDF IQQRGRGLSL
LQETLENHQT SQQSDQFTNK QTPLSQGQPA LQIYTTQCRS GEPYAFSFSS YSPLLLDAIR
ASCHVPISFH PVDMISWSPL SLPLTFADSE GVLIHEEAYV DGAIASPAPP TPHQLTRVVV
SPISGGVGTL DSDQWRISPH DTSWRIGSVT LKGSFPVRLS TQNLRALRTS VGATSSAELE
RWYQLGLDDG RRFCEDWEKI GA
|
|---|
| |