Gene PHATRDRAFT_30113 details

Gene Information

• Locus tag: PHATRDRAFT_30113
• Symbol: pDLDH1
• ID: 7195322
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011688
• Strand: +
• Start bp: 551721
• End bp: 553830
• Gene Length: 2110 bp
• Protein Length: 543 aa
• GC content: 55%
• Product: lipoamide dehydrogenase
• Protein accession: XP_002183630
• Protein GI: 219126786

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CGTTGGTATC CTCGATTCCG TCGTCGTCGT CATCGTCATC GTCATCTGTA TCCACAGTTG 
CGATTGCCAT CTCCAATACT TGCTTGCTTA CAGTTAGTTA GTTAGTTAGT CGGCAAAACA 
ATCCGAACAA GAGTATCAAA ATCAACTACT AGCTGTCTGT CTGTACGCAT TCTTGTAGAC 
AACATTCGTG ATCATGAAGT TTGGGGTGTC GGCCACTCTC GTTGCGGCAG TCTCGTTGCC 
GACGACGACG TTGGCCTTTG CGCCATTGTT GCTGTCGACG TCGTCCTCCT CCTCCGCCAT 
CGCCTCATCT CGGGCACACT ATTCCCGCAT TGCCTCCACG TCTCTCTCCC TGTCCACACC 
GGCCGACGAC TCGGCGTTTG ACTTTGACGT GGCCATTATT GGGTGCGGCG TCGGCGGCCA 
CGGTGCCGCT TTACACGCCC GGGCGCAGAG CTTGCGGACG GCCGTCTTTG CCGGCAACGA 
CGTGGGAGGC ACCTGCGTCA ATCGTGGTTG CGTCCCCAGC AAGGCACTCT TGGCAGCGTC 
TGGAAGAGTC CGGGAAATGC GTGATTCGGC GCATCTGGAA TCACTCGGCA TCCAAGTAGA 
CGCCGACGCC GTCCAGTACA GTCGCGAAGG AATCGCCGCG CACGCCAAGA ATCTGGCCAA 
CCGTGTCAAG GGAAATCTGG AAGCTTCACT CGTTGGTTTG GGAGTTAGTG TGGTGGAAGG 
ACGAGGTGTG CTTACCGGAA AACCGCACCA AGTCAAGGAC GAAACGACCG GAAAGGTTTA 
TACTGCCAAG GTACGTTGGG GTTGCGGGAC GTGGGGAGTG TTGCCGAGTA CTGCGGATCT 
GGCTCGGTGC TTGCACACAC ACACACACAC TCGACTTGCC ATTTTCTCGT CGTTTTTCTC 
ACGCTTGGGG ATACGCGACT TGTTTCTTCC ACAGGACATC ATTTTGGCAC CCGGCTCCAT 
TCCCTTTGTC CCTCCGGGTG TCACGGTGGA CGAAAAAACC GTCTACACTT CCGACGGTGC 
TCTCGAACTA CCCTTTGTCC CGGAATGGGT CGCCATTGTT GGATCCGGCT ACATTGGTCT 
CGAATTCAGT GACGTGTACA CCGCGCTAGG CAGTGAAGTC ACCTTTATCG AGGCCCTCGA 
CAATCTGATG CCCACCTTTG ATCGCGAAAT TGCCAAACAA GCCGAACGAT TGCTCATCCG 
AGACCGACCG ATTGATTACC GTACCGGTGT CTTTGCTTCC GAAGTCACTC CCGGAATTCC 
TGGAGAAAAA CCCGTTACCA TCAAGATGAT TGACGCCAAG ACCAAGTACG TATTTATTCC 
GTATATATTG GGAAAAGTAC TGGCTAGTCG ACGAACCTAT CTCTGACTTC TTTGTCATCC 
CCCCAACAGA GAACACGTGG AAACCTTGGA AGTGGATGCT TGCATGGTCG CCACGGGCCG 
TGTCCCGAAC ACGGCCAACA TGGGTTTGGA AGAAATCGGC GTGGCGACGC AACGCGGTTT 
CGTAGCGGTC AACGAAAAAA TGCAGGTCCT CACCAGCCAC GAAGACGGTC AAGTAGTACC 
CAACGTGTGG TGCATTGGTG ACGCCAACGG CAAAATGATG CTCGCACACG CCGCCAGTGC 
CCAAGGCATT AGTGCGGTGG AGAACATTTG TGGCCGCGCT CACGCCGTCA ATCACGATGC 
CGTCCCGGCG GCCTGCTTTA CGCATCCCGA AATTTCCATG GTCGGTCCTA CCGAAGAACA 
GTGTGTGGAA AAGGCTGCCA AAGAAGGTTG GACCCTAGGC AAATCCCAGG GAAGCTTCCG 
GGCCAACTCC AAGGCCCTCG CGGAAGGCGA AGGCAACGGG ATGGCCAAGG TCTTGTTCAA 
CAAGGAGACG GGCAAAGTTG TGGCGGTGCA TATCATTGGT TTGCACGCGG CCGATTTGAT 
TCAGGAATGT GCCAATGCCG TCGCGGCCGG AACCACCGTG CAGGAATTGT CCATGATGGT 
CCATACGCAC CCGACCTTGA GTGAAGTCAT GGACGAAGCC TTTAAAGGGG CCGTCGGCAT 
GTCGAGTCAC TAAACCGACC CTCGTGCGAG ACACGGGTTG GGGCCATCGA AAACTAACCC 
CACCTTATAC 

 

Protein sequence

MKFGVSATLV AAVSLPTTTL AFAPLLLSTS SSSSAIASSR AHYSRIASTS LSLSTPADDS 
AFDFDVAIIG CGVGGHGAAL HARAQSLRTA VFAGNDVGGT CVNRGCVPSK ALLAASGRVR 
EMRDSAHLES LGIQVDADAV QYSREGIAAH AKNLANRVKG NLEASLVGLG VSVVEGRGVL 
TGKPHQVKDE TTGKVYTAKD IILAPGSIPF VPPGVTVDEK TVYTSDGALE LPFVPEWVAI 
VGSGYIGLEF SDVYTALGSE VTFIEALDNL MPTFDREIAK QAERLLIRDR PIDYRTGVFA 
SEVTPGIPGE KPVTIKMIDA KTKEHVETLE VDACMVATGR VPNTANMGLE EIGVATQRGF 
VAVNEKMQVL TSHEDGQVVP NVWCIGDANG KMMLAHAASA QGISAVENIC GRAHAVNHDA 
VPAACFTHPE ISMVGPTEEQ CVEKAAKEGW TLGKSQGSFR ANSKALAEGE GNGMAKVLFN 
KETGKVVAVH IIGLHAADLI QECANAVAAG TTVQELSMMV HTHPTLSEVM DEAFKGAVGM 
SSH