| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_39088 |
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| Symbol | |
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| ID | 7194747 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011686 |
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| Strand | + |
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| Start bp | 304403 |
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| End bp | 306693 |
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| Gene Length | 2291 bp |
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| Protein Length | 685 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002183069 |
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| Protein GI | 219125610 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.876501 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCGAA TAGGTCTTCT TTCAGCGCTA TTGCTGTTGA GTGCTGCGTT TGCGGAACAG
GGGTTGCGTC GAAAGCGTAA TTTGCTCGAT ATTCAAGTGG AATCGGAGAT CCATCATGAG
ATGATTTCCC CGTACAACGA GCTTGTCCTT GATGATTTTC TTTGGGGAGG CCGCAAGCTC
ATGAAGGTGG ATGGAAAGAG CAAATCGAAA GGTACAATGG ATTCTTTCAG TGCCATGGCC
CTGAAATCAA CCAAGAGTCC AAAGAGCACG AAAGCTGGAT TGAATTCCCC CCAAATGACG
ACTGTTGGAA TCGGATCATT TTCGCCGAAG TCCAAGAAGA AGAGTCAGAA AACAGAAGAT
TGTTACAGCG ACGTTTTTGG GTACTTGTTT TGCGACTCTT CTATGTCTTT CATGTCGATG
TCGGTCTCAA TGTCAATGGT AGCGACTCCA ACAATGCCAA CGAATCCGAC GACGCCAACC
ACTCCAATAG CCCCGCTTAC TCCAACAGCC CCGTCGACCC CATCAACACC GACGACGCCG
ACCGCTCCGA CAACACCGAC CTCTCCAACA GCACCGACGG CACCGACATC GCCAACAGCA
CCAACGGCAC CGACATCGCC AACAGCACCA ACGACACCGA CAATTCCAAC GGTCCCAACA
CAAGCGCCGA TCGATGGGTG TAGTAGCCTC CCGCGCGATG AAGCTTTGAG GACTCTTGTT
GGTGCTATTA CTGACGAAAC TACGCTTGCT GATTCAACCT CTCCGCAAGG ACAGGCTTAC
CAATGGATGC TTAACACTGA CCCTGCCAGT CTCGATCCTT GTACTGACGA CAATGTTTTG
CCTCGGTATG CTTTGACAAC GTTCTACTTT TCCAGCAGTG GAGCTTCCTG GACAAACAGC
TCTGATTGGC TCAGTGGCAT TTCGGAGTGT GCGTGGTATG GCGTTGTATG TAGTAGCACC
GGAACCGTTA CGGAAATTGC TCTGTGTAAG TTGCGGTTTT TTAAATTTAT GTGTGACTTT
TCGACTTCCT CACAATATGC ATTGCTCTTG CAGTCGAAAA CAATCTTGCC GGTACTCTTC
CAACCGAACT GGAGGCGCTG ACTGACATGC AAAGGCTGGA CGTCTTCGAC AATGAGCTCG
GAGGACCGAT TCCAAATATT CTTTCCAAGT GGCCTTTCCT CGCATTCTTC GATGTTGAAA
AGAACCAGCT CACAGGATCG CCCTTTGTGG ACGCGATCGG TCTTTTTAAT TTGCAGTCCT
ATCGTGTCTC GCTGAACGCC TTTGTAGGCG GTACGATCCC AGCTGATTTG GTTGATAAGT
TCCCAAACCT GGTCGAGCTT TGGCTATCCA ACAGTACTAT GATTGGCAGT ATCCCAACAG
AGATTGCGCT TATGGACAAC CTTCGTACGT ATCGTGTTGC CGCATGCGAC AGGTTTTATT
TTGGTGTCTC TCACCCAACA ACGTTCTCTT TCCATTTCTA TAGAATCTAT ATTTTTATAC
GGCAACTCTT TGACTGGAAC TCTTCCTTCC GAACTAGGTC AACTCAATCT CGAGCGTTTG
CAAGTTCAAG ACAACATGTT TGCTGGAAGA ATTCCCACAG AATTGTTCCG CAGCACCAAC
CTTGCTGATT TGCGACTTGA TACGAACAAA CTTGCTGGTC CTATACCTAG CGCGGTAGGC
GCCTTGACCA ACTTGATCGA CTTGCGATTG AACAACAACG TGCTGACTGG GACACTGACC
ACCGAAATCT CTCGTCTTTC CAATCTCGGT GCGTTTTTAC TAGAAACTTC TTCACTCTCA
CTTTTGCTTC GGCATCTAAC CTGTTTTCTT TTCGTTATGT ATACTTCGTT CTAGTCTTTT
TTGTCCTTCA AGACAACCAG CTCACCGGGA CGTTCCCGGA CGCGTTCGAG CCGTTCCAAG
CCTTGCAGTT CGTCGATGTG TCCGGAAACA ACCTGACCGG CCCCTTGCCG CGTACCGTGT
TTGACGTTCC CGTGATTGAG ATTCTGTACT TTGACGACAA TGCGTTCACG GGAACAATCC
CGGGCAACTA CGCGAATGCC TCGAGCCTCC GCGATCTGTG GCTCAACGAC AACCAACTGA
CGGGCACCAT CCCGCCAACG CGTCCCGCTG AGCTCGCGAG TCTCGAGGAA TTCCGTTTGG
ACGGGAACAA CCTGGTCGGG ACTGTGCCGT TATCATTGTG CGCGCTGCCT TCGAGCACGG
CCTTGACGGC CGATTGTGGG GGTCCGTCCC CGGCCGTCGA ATGCGTATGC TGTACCTTGT
GCGTGGCGTA A
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| Protein sequence | MRRIGLLSAL LLLSAAFAEQ GLRRKRNLLD IQVESEIHHE MISPYNELVL DDFLWGGRKL
MKVDGKSKSK GTMDSFSAMA LKSTKSPKST KAGLNSPQMT TVGIGSFSPK SKKKSQKTED
CYSDVFGYLF CDSSMSFMSM SVSMSMVATP TMPTNPTTPT TPIAPLTPTA PSTPSTPTTP
TAPTTPTSPT APTAPTSPTA PTAPTSPTAP TTPTIPTVPT QAPIDGCSSL PRDEALRTLV
GAITDETTLA DSTSPQGQAY QWMLNTDPAS LDPCTDDNVL PRYALTTFYF SSSGASWTNS
SDWLSGISEC AWYGVVCSST GTVTEIALFE NNLAGTLPTE LEALTDMQRL DVFDNELGGP
IPNILSKWPF LAFFDVEKNQ LTGSPFVDAI GLFNLQSYRV SLNAFVGGTI PADLVDKFPN
LVELWLSNST MIGSIPTEIA LMDNLQSIFL YGNSLTGTLP SELGQLNLER LQVQDNMFAG
RIPTELFRST NLADLRLDTN KLAGPIPSAV GALTNLIDLR LNNNVLTGTL TTEISRLSNL
VFFVLQDNQL TGTFPDAFEP FQALQFVDVS GNNLTGPLPR TVFDVPVIEI LYFDDNAFTG
TIPGNYANAS SLRDLWLNDN QLTGTIPPTR PAELASLEEF RLDGNNLVGT VPLSLCALPS
STALTADCGG PSPAVECVCC TLCVA
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