Gene PHATR_2957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_2957 
Symbol 
ID7204745 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp799358 
End bp800479 
Gene Length1122 bp 
Protein Length338 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185955 
Protein GI219121463 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTTCGATGGA TCGTGGTTCG CAACGACGGG GAACCCGATT CCATGATTAA ACTCGTTGGT 
CTCAAATCGC TCTTTTCGAA GCAGTTACCC AAAATGCCGC GGGCATATAT TGCCCGTCTT
GTGTTTGACC GCCGTCATAC ATCCTTGGCT ATTCTCAACG ATAATCCCGA CGTGAAAGAT
TCCGACGAAG AAATTATTGG CGGTATTTGC TACCGTGCTT TTCCGGAAAT GCGTTTTGCC
GAAATTGCTT TTTGTGCCGT TAATGCGTCC CATCAAGTCA AAGGATACGG CACCAAGCTT
ATGAACTTGC TCAAAAAGAT TGGCGCCGAA ACCGGAATCG AATATTTCAT TACGTACGCC
GACAACTACG CCATTGGCTA CTTCAAAAAG CAAGGGTTTG CCAAGAATAT TTCCATGCCC
AAGGGTCGAT ACTTTGGCCT AATCAAGGAC TATGACGGTG GCACACCGAT GGAATGCTAC
GTCCATCCCT CTATTGATTT TACCCGCGTT CCGGAAATGC TGCAGGCGCA ACGGAATTTT
ATTCTCGCGC AAGTGAGTCG CGTCGCCAAG AGCCGGATCG TGTACGAGCC GTTGTCGTCG
TGGCGAGACG CGAGTGAGGA AGGATCCTTG GCAACAGCGA ATTCACGCGT CCCGGGCTTG
ACGGCGACAC CGGTGGGGAC GTCCGCGAAC GCCACAGCCG TTAGCTTATC ACGGTCCAAT
CAAGCGGCCG CCCGCGCGTT GGCCATTCCC GGGATTGCCC AGGCCGGTTG GACGTTGGCC
GATTTGACCA CCGCCAGTGG ACAAGGCAAG GAAGCGGATC GTCAGAAGAG TGCCCTCAAA
ACTACGCTGT TGGCAATGTT ACGGAAAATT GAAGAGCAGC AATTTGCGTG GCCTTTCCGG
GAGCCCGTAG ATCTGACGGA AGTTCCGGAT TATTTGCAAG TCGTGACGAC CCCGATTGAC
TTGTCGACAA TGGAAAAGCG GATCCGGGCC GATCTGTACC GGTCCAAGCA AATGGCGTTT
GCCGATCTAA TGCTCATGGT GAACAACTGC AAATTATACA ATGACGACGG AAGCCCGTAT
ATGGAGTGTG CGACTAGTTT GGAACGATAC GTGAAGAATC TC
 
Protein sequence
LRWIVVRNDG EPDSMIKLVG LKSLFSKQLP KMPRAYIARL VFDRRHTSLA ILNDNPDVKD 
SDEEIIGGIC YRAFPEMRFA EIAFCAVNAS HQVKGYGTKL MNLLKKIGAE TGIEYFITYA
DNYAIGYFKK QGFAKNISMP KGRYFGLIKD YDGGTPMECY VHPSIDFTRV PEMLQAQRNF
ILAQVSRVAK SRIVYEPLSL SRSNQAAARA LAIPGIAQAG WTLADLTTAS GQGKEADRQK
SALKTTLLAM LRKIEEQQFA WPFREPVDLT EVPDYLQVVT TPIDLSTMEK RIRADLYRSK
QMAFADLMLM VNNCKLYNDD GSPYMECATS LERYVKNL