Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_46163 |
Symbol | |
ID | 7201248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011677 |
Strand | - |
Start bp | 453075 |
End bp | 454074 |
Gene Length | 1000 bp |
Protein Length | 326 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180638 |
Protein GI | 219119770 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.911457 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCAGCA TCGACGGTTG TCACCCTTCC TCTCAAGTGA CCAGAAGGGG AGAAGAGTGC AGGCAAAGGG GGTTTGGCTT CGCGGTAGAC ATATTGAAAC GCGAAGATGC CAATGCATGT TTGAGTATGT TTGAAAGATA CGAAGAACGC CTTGGTGGGA AGCCGTTGTC CGGGGACGAC CGTTTCAAAC TCCATTTGTT GCTACCGTGG GTGTGGGCAT TGGTCCATAA CGAAAGAATC GTACAGCTCG CGTGTCGGTC CTTGAATACT GTCGACGTGT GGTGCTGGTC ATCTGACGTG AACGTGAAAG AACGAAGGTC GGATGCCTAT TTCCCTTGGC ATCAGGACTC AACGTACGCC GGTATTTCAC CCGTTCACAC TGCGGTCACA GTATGGTTGG CTTTGACACC CTCGAATGAA GCATCCGGAT GCCTCCAGTG CATACCAAAC TCGCAGGGTC GGCAGCTAGA GCATGTGGAA GGGCATGTTC AGGACTCGAG TAACGCCTTG TCGAAGCAAC AAGAGATTGT AGATTTTCCT GACACCATTC ATCCAGGACA AGCAGTAAGT ATGATTCTGG AGGCCGGCCA AGCCAGCGTC CACGACTTTT GGACCGTGCA CTCCTCCCGT CCCAACACAA GCGAACATCG TCGCGTCGGT CTCGCATTGA GGTTCGTGTC GGCACACGCA CACAAGACAG GCTGCCGGGA ATCGGCCACG TTGGTTTCCG GAAACGGACA CGGACTTTTT GACGAAGAAA TCGCACCAAC CGAGGAGCTT GGACAGGCTG AGCGACAACG GCACAAGCAA GCCATGGCCA AAGAAAAGAG CAATTATTTG TTGACTGTAA AATCGCATTA CTGCCTTGGC GAGCAGCCGG AGGCCACCGC TGTCCTTTTC ATAGACCTTC TGATCAGTGG TCTTCACGCA GACGTGTCAA ATCCATTCAG AGCGCAACAA TATGTAAACT CCCTAATGTA AACAAGAGAA AAGCCTATTC
|
Protein sequence | MTSIDGCHPS SQVTRRGEEC RQRGFGFAVD ILKREDANAC LSMFERYEER LGGKPLSGDD RFKLHLLLPW VWALVHNERI VQLACRSLNT VDVWCWSSDV NVKERRSDAY FPWHQDSTYA GISPVHTAVT VWLALTPSNE ASGCLQCIPN SQGRQLEHVE GHVQDSSNAL SKQQEIVDFP DTIHPGQAVS MILEAGQASV HDFWTVHSSR PNTSEHRRVG LALRFVSAHA HKTGCRESAT LVSGNGHGLF DEEIAPTEEL GQAERQRHKQ AMAKEKSNYL LTVKSHYCLG EQPEATAVLF IDLLISGLHA DVSNPFRAQQ YVNSLM
|
| |