Gene PHATRDRAFT_12909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_12909 
Symbol 
ID7201342 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011677 
Strand
Start bp287303 
End bp288145 
Gene Length843 bp 
Protein Length258 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180406 
Protein GI219119285 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCACA TCTACCTCGG ACCAAGCAAC ATTACGTCGA GCATTCCAGA GTCACTCTAC 
CACTTGTCTC ATTTGACTCA TCTCTACCTC AACGATTGCC AGTTGACGGG CACGCTTTCT
GAATCTATCT CAAGTATGAC TTCACTACAA GGTTTAGGAC TTCACAACAA CTATCTCAAC
GGGCCAATTC CCACCACTAT CGGTATTCTC GACGATCTGC GCGTTTTGTA TTTGGACGAA
AATGCGTTGA CGGGAACTAT TCCTACTTCG TTAGGCAAGC TGGAAAATCT GGTCGATCTA
CGCTTACGAC GCAACCATCT ACGTGGGAGT ATCCCAACTC AACTTTCCAG CCTACGGGTC
TTGCAAATCT TGTACGCGGA CAATAACCAA TTGACTGGCA CTATCCCGGC CGGTCTCGGC
AATCTGTTGT TGTTGCGCGA GTTGCAGCTC TACCACAATC GCTTAGATGG AATCATTCCA
GAGTCCTTTA GCTCACTCGT CCTTTTGGCT ATCCTCTATC TCGACGGGAA CTTGCTTTCT
GGTTCCATTC CAAACCTTTC CAATTCTCGT TTTTTGGAAA GTATCTACCT CTCTGATAAC
GACTTGACCG GGAATATACC GCCTTCACTC GGCTCACTCC AATACCTTAA GCATGTCAAG
CTTGGCGGTA ATCGACTCGC AAATCGACTG CCGTCAGAGC TAGGACAGCT AGAAAAGTTA
CAGACACTGG ACGTAAGCGT TAATCTTCTG GACGGTACCG TGCCCGAAAC CTTGACGAGA
ATGACTTCTG TGACCGAGGT CCGTTTACAC AGCAACCACT TGGTCGGCTC CATTCCTTTT
GGA
 
Protein sequence
MQHIYLGPSN ITSSIPESLY HLSHLTHLYL NDCQLTGTLS ESISSMTSLQ GLGLHNNYLN 
GPIPTTIGIL DDLRVLYLDE NALTGTIPTS LGKLENLVDL RLRRNHLRGS IPTQLSSLRV
LQILYADNNQ LTGTIPAGLG NLLLLRELQL YHNRLDGIIP ESFSSLVLLA ILYLDGNLLS
GSIPNLSNSR FLESIYLSDN DLTGNIPPSL GSLQYLKHTL DVSVNLLDGT VPETLTRMTS
VTEVRLHSNH LVGSIPFG