Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_45539 |
Symbol | DRR1 |
ID | 7200614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011675 |
Strand | - |
Start bp | 496974 |
End bp | 498117 |
Gene Length | 1144 bp |
Protein Length | 319 aa |
Translation table | |
GC content | 54% |
IMG OID | |
Product | diatom response regulator 1 |
Protein accession | XP_002179854 |
Protein GI | 219118147 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GAGTTGTTCT CCCCGTAGCA GCATTGTGGT CCGATTCGGT CGTCTCTCAA TAACAACGTT TGGTGCCAAC CACATTGGCG TGGTGTCGTC ACAATCTAGA CGAGCTCTGC ACAAACGAAC GAACTTGCTA ATTGCGGGAG GAGGGAACGA CTAGATTGTG CCGTACCGTA CCGTACCGAA CCGAATGATT GCCTTCTACC ATCGCTACCG TACGCCGCTG CGAAGGCTGA GACTCTGGTG TGTGTGTCTG ACGTATTTAG TAAGTCTGCA TTCCACCAAT GCTTTGATCG CGAAAAGCTG CGGTTCACGC CAAATCACCG GCACGTGGGG CTACGCTCAC TGGGCCCGTT ACGGAGCGCT CCGGGTCAAA ACCTTCGACC CCGCCGACAA CGAAACGGAA CACGACCGGC GACTCCAAGA TCACACTTTC CAGGCACGGA ATCGCTGTTG GATTGTACTC GTCGACGACG AAGAGTCTAT TCGTGCGTCC GTGGGACAGT TCCTCTTCGA CCAAGGCTAT CAGGTCACCG CCTGTGCCGA CGCCGACGCC GTTTTGCAGG TCTGTGCGGA ACCCCAACGT CCCGGCCAAT TGCCCCGACT GCCGGACGCC ATTGTTAGTG ACGTGCGGAT GCCGGGAAAG GACGGTATTG AACTGCTCGG TATTATACGA AACAGCCAAC GCCTCGAACG CGTTCCTGTT ATCCTATTGA CGGCGAAAGC GATGACCCAA GATCGTGTAC TGGGATACCG GGCCGGTGCG GACGTATACC TGCCGAAGCC GTTCAATCCC GACGAGCTAC TTAGTATACT GGATAACACC ATTCAAAGAA AACAGCAAAT GACGGGAACA AACGGTAGTT TGTTGGACTT GAAAGAGGAA ATGTCCAATA TCAAGGAGCT CATGAAACAG AATGGGAAAA ATGTGGTGAA AAAGACGACC GTCTATTTGA CGCCAACGGA GCGAAAGGTA CTCGGCTACC TATCGCAAGG GTACACAAAC GCAGAAATTG CCGACGCCCG TGGGGTCAAT GTTCAAGGAG TTATCCGGAT GATACAAAAA ATGTACAGCG AGACCGGAAC ACGGAATCGA ACCGAGCTCG TCCGGTGGGC CATGCAAACC GGTTACGTCT CGCAAAAGCG ATGA
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Protein sequence | MIAFYHRYRT PLRRLRLWCV CLTYLVSLHS TNALIAKSCG SRQITGTWGY AHWARYGALR VKTFDPADNE TEHDRRLQDH TFQARNRCWI VLVDDEESIR ASVGQFLFDQ GYQVTACADA DAVLQVCAEP QRPGQLPRLP DAIVSDVRMP GKDGIELLGI IRNSQRLERV PVILLTAKAM TQDRVLGYRA GADVYLPKPF NPDELLSILD NTIQRKQQMT GTNGSLLDLK EEMSNIKELM KQNGKNVVKK TTVYLTPTER KVLGYLSQGY TNAEIADARG VNVQGVIRMI QKMYSETGTR NRTELVRWAM QTGYVSQKR
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