| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_10881 |
|---|
| Symbol | |
|---|
| ID | 7198012 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011672 |
|---|
| Strand | - |
|---|
| Start bp | 174022 |
|---|
| End bp | 175323 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002178444 |
|---|
| Protein GI | 219115297 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0264746 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTCGTGTTTG CGGCTGCCTT GGTTTTTTTC ATGCAAGCCG GCTTTGCCAT GCTGTGCGCT
GGAGCCGTTA GGGCCAAGAA TGTTCAAAAC ACCATGCTCA AGAATCTTTT GGATGCTTGT
GGTGCCGCCA TTGCGTTCTT TACTGTAGGC TACGCCTTTG CCTTTGGCGG TACGGACTTT
CCCACCGACA CCGACACCGA CACCGGCAAC AACCAAACAA CATTCATTGG CACATCGAAC
TTTTTCTTGG TGAATGTGGA CGATTATTCC TTTTGGCTGT TTCAATACGC ATTTTCCGCC
GCGTCCGCAA CCATTGTTGC TGGAACACTG GCTGAACGGT GTCAAATGGC CGCCTACCTG
GGATATTCCG CTTTGTTAAC GGGATGGGTG TACCCCATTG TCGCTCACGC TGTATGGAAC
GTCCACGGCT TCCTATCGGC TCATGCGGTA GAACCTTTGT GGGGGGTTGG AATGGTAGAT
TTTGCCGGTT CTGGGGTCGT TCACGTTACG GGAGGTGTGA CAGCGCTCTT CGCGACAATA
ATTCTGGGTC CCCGCCGTGG ACGCTTTCAC GACCAAGATG GCCAAAGATT GATAAGGCCG
CGAATATTTC CTGGACACTC CTTTGCTCTG CAAATGCTTG GAACCCTTAT CTTATGGTTT
GGCTGGTACG GATTCAATAT TGGCGCTGCT CTGCTGCTGG ACGTGCCTAG TTCAGACAAT
ATTGCAGCTC TGGCTGCGGT GAATACGACC TTGTCGGGCG GGACGGCTGG CATCGTTGCT
CTCTTTTTCA ATTTGTGGTA TCTGGACAAA AGAACTGGCG AAGCCTATTT TGACTTGAAA
TTTGCCATGA ATGGGTGCCT CTGCGGTCTC GTGGCCATCA CTGGAGGCTG TGGTGTGGTC
GAACCCTGGG CTGCCGTTGT GATTGGCTTT GTCGCCGGTT TGTTGTACAA CATCGGAAGT
CGCGGACTTA TATATTTGCG TTTGGATGAT GCCGTGGATG CCATTCCGGT ACATTTGTGC
AACGGCTCGT GGGGTCTCGT AGCAGTAGGG CTGTTTGCCT CCCCCTCCCG GCTACTAGTT
ATTTACGGAC ATAGCGATCA TCCAGGATGG TTTTACTCAT TACGAGATGG CGAATCCGAT
TTCCGGTTAC TGGCTTCCCA GTTGGTGGGC CTTATTTTCA TTGTCTTCTG GGTCATGTTC
AACATGCTGC CTTTTTTCGT TTGGTTAAAC TACCGTGGCT GGTTTCGGTC CGATCCGTTG
GAAGAGTTGG TGGGTCTCGA CCTGAGCTAT CACGGCGGTT TA
|
|---|
| Protein sequence | VVFAAALVFF MQAGFAMLCA GAVRAKNVQN TMLKNLLDAC GAAIAFFTVG YAFAFGGTDF
PTDTDTDTGN NQTTFIGTSN FFLVNVDDYS FWLFQYAFSA ASATIVAGTL AERCQMAAYL
GYSALLTGWV YPIVAHAVWN VHGFLSAHAV EPLWGVGMVD FAGSGVVHVT GGVTALFATI
ILGPRRGRFH DQDGQRLIRP RIFPGHSFAL QMLGTLILWF GWYGFNIGAA LLLDVPSSDN
IAALAAVNTT LSGGTAGIVA LFFNLWYLDK RTGEAYFDLK FAMNGCLCGL VAITGGCGVV
EPWAAVVIGF VAGLLYNIGS RGLIYLRLDD AVDAIPVHLC NGSWGLVAVG LFASPSRLLV
IYGHSDHPGW FYSLRDGESD FRLLASQLVG LIFIVFWVMF NMLPFFVWLN YRGWFRSDPL
EELVGLDLSY HGGL
|
|---|
| |