Gene PHATR_33493 details

Gene Information

• Locus tag: PHATR_33493
• ID: 7203883
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011671
• Strand: +
• Start bp: 1065809
• End bp: 1067937
• Gene Length: 2129 bp
• Protein Length: 684 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002186178
• Protein GI: 219113189

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGGTCT TTGCGGTCTT GGCTTCCACG AGCGCCCGGA GGGCGGCTGC CTTTATCCCA 
GGTCGATCGC GGTCGGCAGC TATCACAAAA GTATTTGGTG GCCTTCCTCT TCAAAGATCA 
CACTCGTTTC ACTTTTTGGA ACAAAAGCAA TCGTCGCGTC TCTTCGCGAC CATCGCTGAC 
GAAGCTGCAA CTGTCGAGGA AGAAGAGCTT GTGGAACTAC CCACCAACGA CAACGATGAA 
GAGTTATTAC GTATCCGACA TTCATCGGCT CATGTTATGG CAATGGCGGT TCAGCGGATT 
TTCCCGGAGG CCCAAGTGAC AATTGGTCCC TGGATCGACA GCGGCTTCTA CTACGACTTT 
TTCTTTCCCG AAAGGACCGA TGAAGAATCG GGAGAAACTA TTCCGGCACG GAAGCTTTCC 
GAGCAGGATT TGAAAGACGT TAAAAAGGCA ATGGATAAGA TCATCGGGAA AGACTATCCG 
ATTTCTCGTG AGGATGTTAG TCGTGAAGAA GCGAGACGGC GCATTGAGAA AATCGGTGAA 
CCCTTCAAGC TAGAAATTCT AGACAGTATC AAGACCGAAC CTATCACGCT TTATCACATT 
GGCGACGAAT GGTGGGACCT GTGCGCTGGT CCGCACGTGG ATTCAACGGG AAAGCTTCCC 
AAAAAAGCTA TACAATTGCA AAGCGTGGCG GGAGCCTACT GGCGTGGCGA CGAGAATCGC 
GAAATGCTCC AACGCATCTA CGCCACGGCC TGGAAGGATC CGCAACAGCT CAAACAATAC 
AAGAAAATGC TCGAAGAAGC GAAGAAACGC GATCATCGTA TGCTGGGGAA GAAACTGGAT 
CTATTCTCGA TCCAAGAAGA CGCCGGTGGA GGCCTCGTAT TTTGGCATCC CAAGGGGTCC 
AAGGTTCGCA GGATGATTGA AGATTTCTGG AAAGACGCAC ATATCCAAGA TGGCTACGAC 
GTTGTCTATT CGCCACACAT CGCAAATATT GATTTGTGGA AAACTTCTGG CCATTTCGAC 
TTTTACCGTG CGGACATGTT CGATCAAATG GATGTTGAGA ATGAACAGTA TCAGATCAAG 
CCAATGAACT GCCCGTTCCA TTGTCTAATG TATAAGGATG AGCTTCGATC ATATCGTGAT 
CTGCCCTTTC GGTGGGCGGA GCTAGGAACG GTATATCGGT AAGTGTAGAA AATTTGGGCA 
CAGACATTTA TCAAACTGTA TAACTTCTGT GCTAACGTCT CTGGTGCATT AGGTACGAGC 
GTTCTGGAAC TCTGCACGGC CTCATGCGTG TCCGTGGTTT CACTCAGGAC GACGCGCATA 
TTTTTTGTCT TCCGGAACAA TTGCAGGATG AGATTGTTGG TGTTCTCGAC TTGACTGAAA 
CGATCTTGTC ACGTTTTGGC TTTGACAAGT ACGATGTTAT GCTCTCGACT CGTCCCGAAA 
AGTCGGTAGG TTCGGACGAG ATTTGGGACG CAGCTACTGT TGCGTTAGAA GGAGCCCTCA 
AAGTCAAAGG CTGGGATTAC AATGTTGACG AGGGAGGCGG CGCCTTTTAT GGGCCAAAAA 
TTGACCTCAA AATCCGAGAT GCGATTGGCC GGCAGTGGCA GTGCTCTACA GTCCAATGCG 
ATTTCAATTT GCCAGAACGC TTCGGACTCG AGTATGCAAG CGCCGATGGC ACACGAGAAC 
GCCCTATCAT GGTGCATCGT GCTATTTTTG GTTCTATCGA GCGGTTTTTT GGAATCCTAA 
TAGAGAATTG TTCAGGCGAC TTCCCACTTT GGTTGGCTCC GACGCAATTA AAGCTGTTAC 
CAGTCACGGA TGCTGTGCAT GAGTATTGTA ATGAGATTGC AGCGAAGGCT CTAAAAATGG 
GACTCCGTAT CGAAGTAGAT CGCGGAAGCG AACGATTGGC TAAGCAAATT CGCAACGCTG 
AACAGGCTCG TATTCCAGTT ATGGCGGTGG TTGGTATGAA AGAGATGGAA TCAAATTCTC 
TTGCTGTGCG TAGTCGGAAG CTGGGAGATC TCGGGTCTTT CGAAGTGGAA GATCTGTTGA 
GCGAATTGAA ACGTTGCGCT GCAGCTGCAG AGGAGATGAC TCTGGTCGGC GAAAAGGAAG 
GAAAGATTGA CAGCGAGTCC GTCAACTAA 

 

Protein sequence

MSVFAVLAST SARRAAAFIP GRSRSAAITK VFGGLPLQRS HSFHFLEQKQ SSRLFATIAD 
EAATVEEEEL VELPTNDNDE ELLRIRHSSA HVMAMAVQRI FPEAQVTIGP WIDSGFYYDF 
FFPERTDEES GETIPARKLS EQDLKDVKKA MDKIIGKDYP ISREDVSREE ARRRIEKIGE 
PFKLEILDSI KTEPITLYHI GDEWWDLCAG PHVDSTGKLP KKAIQLQSVA GAYWRGDENR 
EMLQRIYATA WKDPQQLKQY KKMLEEAKKR DHRMLGKKLD LFSIQEDAGG GLVFWHPKGS 
KVRRMIEDFW KDAHIQDGYD VVYSPHIANI DLWKTSGHFD FYRADMFDQM DVENEQYQIK 
PMNCPFHCLM YKDELRSYRD LPFRWAELGT VYRYERSGTL HGLMRVRGFT QDDAHIFCLP 
EQLQDEIVGV LDLTETILSR FGFDKYDVML STRPEKSVGS DEIWDAATVA LEGALKVKGW 
DYNVDEGGGA FYGPKIDLKI RDAIGRQWQC STVQCDFNLP ERFGLEYASA DGTRERPIMV 
HRAIFGSIER FFGILIENCS GDFPLWLAPT QLKLLPVTDA VHEYCNEIAA KALKMGLRIE 
VDRGSERLAK QIRNAEQARI PVMAVVGMKE MESNSLAVRS RKLGDLGSFE VEDLLSELKR 
CAAAAEEMTL VGEKEGKIDS ESVN