Gene PHATR_10524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_10524 
Symbol 
ID7204151 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand
Start bp12974 
End bp13821 
Gene Length848 bp 
Protein Length256 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185982 
Protein GI219112797 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTTGCATCTT CCGATCTTCC TATGGCAAGC TTTGAGGAGA TTCAAGGAAT TGACGATGCT 
AAGCTGGAAG TCATGGAATT AGTGGACACA TTGCGAAACC CGGAAAAGTA CGCCATTTTA
GGTGCCCGAG CACCTACAGG TAAGTTTCTG TTGCTGCATG TGGTACATCG GGTCTAATGT
GTTGACTTGA GGTCTCAATG CTATCCGTGT CTTTGTTAGG ACTGTTGCTT GAAGGACCTC
CCGGTACGGG AAAGACAATG TTGGCCAGGG CGACCGCTGC TTCCGCCGGT GTTCCACTAT
TGTACTGTTC TGGTAGTGAC TTTGTTGAGA TGTTTGTTGG TCGGGGAGCT GCTCGGGTGC
GTAAACTTTT TGAACGAGCA GCGCGTCTGT CGCCGTGCAT TATTTTTGTG GACGAACTTG
ACGCACTTGG CAAATCTCGC GATGCCGGCG GTGGAATAGG ACCCTTTTCA CGAAGTAATG
ACGAAGCTGA GCAAACTTTG AATCAGCTAC TAGCATGCAT GGATGGACTT GATAGCTCCA
GGAGGATTTG TGTGCTGGCT GCAACAAATC GAAAAGACGT ACTAGACTCA GCGTTGATTC
GTCCGGGACG GTTCGATCGC ATTGTTAAAT TGAAACTGCC GGACACAAAC GGCCGTGAAA
ATATTTTGCG AGTGCATTGT ACAAAGTTGC CCGGCTTTCA AGAAGGATCC GGAGTCGACT
CGAATCGGAC AGGGTCGCTT GGAAAGGGTA GGAGAGTCGA TTTGGCCGCG ATATCTGTAA
TGACGGAAGG GTTCAGCGGC GCCGAGCTGG AATTTTTGGT CAATGAAGCC GCAATTCGGG
CCGTACGA
 
Protein sequence
LASSDLPMAS FEEIQGIDDA KLEVMELVDT LRNPEKYAIL GARAPTGLLL EGPPGTGKTM 
LARATAASAG VPLLYCSGSD FVEMFVGRGA ARVRKLFERA ARLSPCIIFV DELDALGKSR
DAGGGIGPFS RSNDEAEQTL NQLLACMDGL DSSRRICVLA ATNRKDVLDS ALIRPGRFDR
IVKLKLPDTN GRENILRVHC TKLPGFQEGS GVDSNRTGSL GKGRRVDLAA ISVMTEGFSG
AELEFLVNEA AIRAVR