Gene PHATR_10187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_10187 
Symbol 
ID7204293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand
Start bp298152 
End bp298664 
Gene Length513 bp 
Protein Length171 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002186037 
Protein GI219112907 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AACTCAACGT ACGGAAGTCA CGACTACTGG GAAGATCGTT TTGAAAACGA AGACAGTTTT 
GAATGGCTGC TCTCTTACGA ACAACTTGCA GCCCAAATTG AACCCCATCT CCTGCCGGTC
AGTCGCATTC TCGTCGTCGG GTGCGGCAAC GCTCCATTTT CCGCCGACCT CTACGATGCC
GGATATCACA ATATTGTCAA CGTAGACTAT TCCGAAACGG TAATTGCCAA TATGCAACAA
AGGCACCTAA CGGAGCGCCT CCAAATGGAA TGGCTTGTCA TGGACATGAC AGATCTGTCG
GCATTGATGG ACGCCAGTTT CGATGTCGTA ATCGACAAGG CTGCCATGGA TGCTATCATG
ACCAAAGAAA GCGATGTTTG GAATCCCGAT GCTTCTGTAG TACGAGCTAG TCGTGACATG
TGTCGACATA TCTCACGAAT CCTCCGACCG GACGGCGGTG TATTTCTACA AATCAGCTTG
GCACAACCAC ATTTTCGCAA ACGGTATCTT TTG
 
Protein sequence
NSTYGSHDYW EDRFENEDSF EWLLSYEQLA AQIEPHLLPV SRILVVGCGN APFSADLYDA 
GYHNIVNVDY SETVIANMQQ RHLTERLQME WLVMDMTDLS ALMDASFDVV IDKAAMDAIM
TKESDVWNPD ASVVRASRDM CRHISRILRP DGGVFLQISL AQPHFRKRYL L