Gene PHATRDRAFT_17928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_17928 
Symbol 
ID7196943 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp2319437 
End bp2320491 
Gene Length1055 bp 
Protein Length168 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002176957 
Protein GI219110411 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGTTTCGAAA GGTGCGTACG GGAAGGCGGA GTACACCATG GCGGTGGGGG AAACTTTGGA 
AACACTGTCA GAGGCGACGA AACGGCTGCA AGTCCATGAA CCGTATGAGC CATAGGGAAC
TATCTGCCGG ACAAAGATTG GACAAAGGAC TCCCCTGAAT CCCTAACAGC TCTTCCAGAA
GAGTGATCGC TGAGAAATTA GAATTGAGCG ATCACACAAG TCTTCATCTT GTAAATACTT
GCGTTGGCGC TCCACAACTG CACTAACAGT TACTTGCTCC GGTTTTCAAT ATAACAGTAC
ATGACGTAAA ATGCAATACG ACAGTTGCCC AACGATAGCA CCCTTTTTGG GCTACATGGG
CGTTGCCGCT TCCATTGTCT TTGCCAGTAA GTCGCAGCTT TCTTGCGTGT TTGGTAGCAA
CAGGAATCAT GGAGCCTCTT GAGACCAAGC CCTTGAACGA TTACAGAACA TCGACGACAT
TGAAACCTGA TTTTTTTGAA ACCAGTAGCT GACGTCTTTC GTCTGTCCTG TTGCTTGTAG
ATGTTGGCGC CGCTGCCGGA ACAGCCCGCG CCGGAACAGG TATTATGCAG AGTGGCATCA
AAAGTCCCGA GCTGGTTTGG AGAAATTTGA TACCGATAGT CATGGCGGGT GTCAACGGAA
TTTACGGACT GATTACGAGT ATTGTTATAT TGGGCTCCAT TTCTGCTCCA GTGGACGGTG
GATACAATCA GTATTCTCTG TATACTGGAT GCGCCCACTT GGCCGCGGGT CTGTGTTGCG
GTTTGAGCGG TCTCGGCTCG GGCTTATGCA TTGGTATTGC CGGAGACGCC GCCATAATGG
CGTGTGGGGC CTACAGCGTA GCCTCCAAGC GTTCGGCGGG ACGAGGTCGA GGGGGTGGGC
GTGCAAGAGG TGGCGAAAAG AAGAAGGGCG GGGGCAGTGA GAAGCTGTTC GTGGCCATGG
TTTTGGTCCA AGTCTTTGCC GGTAATATTG CTCTCTACGG ACTGATTGCG TCAATCATTC
TGAGTCAACA AACATACTAC TGCGGCGGTC AGTAA
 
Protein sequence
MQYDSCPTIA PFLGYMGVAA SIVFANVGAA AGTARAGTGI MQSGIKSPEL VWRNLIPIVM 
AGVNGIYGLI TSIVILGSIS APVDGGYNQY SLYTGCAHLA AGLCCGLSGL GSGLCIGIAG
DAAIMACGAY SKLFVAMVLV QVFAGNIALY GLIASIILSQ QTYYCGGQ